RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 POTEBQ6S5H4 581 aa10.23□□□□□ -0.77
NHLRC3-202ENST00000379600 ARFGAP2Q8N6H7 521 aa10.23□□□□□ -0.77
NHLRC3-202ENST00000379600 LRRC45Q96CN5 670 aa10.23□□□□□ -0.77
NHLRC3-202ENST00000379600 TRIM51Q9BSJ1 452 aa10.23□□□□□ -0.77
NHLRC3-202ENST00000379600 DDX25Q9UHL0 483 aaKnown RBP10.23□□□□□ -0.77
NHLRC3-202ENST00000379600 HDAC9Q9UKV0 1011 aa10.23□□□□□ -0.77
NHLRC3-202ENST00000379600 DDX3XO00571 662 aaKnown RBP eCLIP10.22□□□□□ -0.774e-7■■□□□ 14.2
NHLRC3-202ENST00000379600 C21orf2O43822 256 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 GNA14O95837 355 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 SHBGP04278 402 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 SSBP05455 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 HOXA7P31268 230 aaPredicted RBP10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 SEPT2Q15019 361 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 ALKBH5Q6P6C2 394 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 CCDC121Q6ZUS5 278 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 HES6Q96HZ4 224 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 ADAM7Q9H2U9 754 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 TPX2Q9ULW0 747 aaKnown RBP10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 PLA2G4BP0C869 781 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 PRKCIP41743 596 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 PARP9Q8IXQ6 854 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 LRRC27Q9C0I9 530 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 MTFR1LQ9H019 292 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 ACTR5Q9H9F9 607 aaPredicted RBP10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 IGSF9BQ9UPX0 1349 aa10.22□□□□□ -0.77
NHLRC3-202ENST00000379600 BTDP43251 543 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 SLC12A3P55017 1021 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 EPHA7Q15375 998 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 HERC4Q5GLZ8 1057 aaPredicted RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 C10orf76Q5T2E6 689 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 GPBP1Q86WP2 473 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 CCDC114Q96M63 670 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 RAB34Q9BZG1 259 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 DPH5Q9H2P9 285 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 SUCLA2Q9P2R7 463 aaPredicted RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 SRP68Q9UHB9 627 aaKnown RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 ZNF335Q9H4Z2 1342 aaPredicted RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 ZNF831Q5JPB2 1677 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 CAND2O75155 1236 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 PPFIA2O75334 1257 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 MED24O75448 989 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 CCDC172P0C7W6 258 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 SNHG28P0DPA3 235 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 NR2F2P24468 414 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 COPB2P35606 906 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 STAT3P40763 770 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 PSEN1P49768 467 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 RHBDL3P58872 404 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 DHX9Q08211 1270 aaKnown RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 XRCC4Q13426 336 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 EDRF1Q3B7T1 1238 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 LNX1Q8TBB1 728 aaPredicted RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 ZNF317Q96PQ6 595 aaPredicted RBP10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 JMJD4Q9H9V9 463 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 ERVK-5Q9HDB9 667 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 OSGEPQ9NPF4 335 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 ZDHHC18Q9NUE0 388 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 STRCQ7RTU9 1775 aa10.21□□□□□ -0.77
NHLRC3-202ENST00000379600 DDX3YO15523 660 aaKnown RBP10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 AKAP3O75969 853 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 BAG3O95817 575 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 RFC4P35249 363 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 NFIXQ14938 502 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 ERMARDQ5T6L9 678 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 EPM2AIP1Q7L775 607 aaPredicted RBP10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 WDR66Q8TBY9 1149 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 SGSM3Q96HU1 749 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 SLITRK6Q9H5Y7 841 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 PNMA2Q9UL42 364 aa10.21□□□□□ -0.78
NHLRC3-202ENST00000379600 CCDC188H7C350 402 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 hCG_1984214I3L0E3 225 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 PSMC6P62333 389 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 SETQ01105 290 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 TTBK2Q6IQ55 1244 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 PEX26Q7Z412 305 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 AMIGO3Q86WK7 504 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 ZNF713Q8N859 430 aaPredicted RBP10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 SLC30A5Q8TAD4 765 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 ATXN2LQ8WWM7 1075 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 PSMD1Q99460 953 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 IKZF4Q9H2S9 585 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 PPP1R9AQ9ULJ8 1098 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 PCDHA12Q9UN75 941 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 FAM170AA1A519 330 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 POTEFA5A3E0 1075 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 TMCO5BA8MYB1 307 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 PPIP5K2O43314 1243 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 CASP4P49662 377 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 MMP14P50281 582 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 EIF6P56537 245 aaKnown RBP10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 KRT71Q3SY84 523 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 POTEGQ6S5H5 508 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 POTEEQ6S8J3 1075 aa10.2□□□□□ -0.78
NHLRC3-202ENST00000379600 CCDC65Q8IXS2 484 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms