RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 TTC38Q5R3I4 469 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 FERMT3Q86UX7 667 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 FAM49AQ9H0Q0 323 aaPredicted RBP24.68■■□□□ 1.54
GFRA3-202ENST00000378362 PCDHB6Q9Y5E3 794 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 VPS37CA5D8V6 355 aaPredicted RBP24.68■■□□□ 1.54
GFRA3-202ENST00000378362 GNAT1P11488 350 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 TMEM62Q0P6H9 643 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 PPIGQ13427 754 aaKnown RBP eCLIP24.68■■□□□ 1.54
GFRA3-202ENST00000378362 MBTPS1Q14703 1052 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 TMEM240Q5SV17 173 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 ATP8B4Q8TF62 1192 aa24.68■■□□□ 1.54
GFRA3-202ENST00000378362 NAP1L4Q99733 375 aaKnown RBP24.68■■□□□ 1.54
GFRA3-202ENST00000378362 ZBTB42B2RXF5 422 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 PITPNM1O00562 1244 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 SELPP16109 830 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 JAK3P52333 1124 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 PRKCEQ02156 737 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 TRAF7Q6Q0C0 670 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 LRRC8DQ7L1W4 858 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 CAGE1Q8TC20 777 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 DNAJB3Q8WWF6 145 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 SNX21Q969T3 373 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 TTC12Q9H892 705 aaPredicted RBP24.67■■□□□ 1.54
GFRA3-202ENST00000378362 IL23AQ9NPF7 189 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 RGL1Q9NZL6 768 aa24.67■■□□□ 1.54
GFRA3-202ENST00000378362 SPIRE1Q08AE8 756 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 PPP2R5CQ13362 524 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 HSCBQ8IWL3 235 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 MTMR9Q96QG7 549 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 CXXC1Q9P0U4 656 aaPredicted RBP24.66■■□□□ 1.54
GFRA3-202ENST00000378362 WRAP73Q9P2S5 460 aaPredicted RBP24.66■■□□□ 1.54
GFRA3-202ENST00000378362 PCDHA12Q9UN75 941 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 IGSF9BQ9UPX0 1349 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 MYO9BQ13459 2157 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 CHD9Q3L8U1 2897 aa24.66■■□□□ 1.54
GFRA3-202ENST00000378362 A0A087WWV3 80 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 NBNO60934 754 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 BAG4O95429 457 aaKnown RBP24.65■■□□□ 1.54
GFRA3-202ENST00000378362 SFNP31947 248 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 CYP4A11Q02928 519 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 LRCH3Q96II8 777 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 FTOQ9C0B1 505 aaKnown RBP eCLIP24.65■■□□□ 1.54
GFRA3-202ENST00000378362 CHD7Q9P2D1 2997 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 POTEMA6NI47 508 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 TBX3O15119 743 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 KLRC1P26715 233 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 TCTN1Q2MV58 587 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 RNPC3Q96LT9 517 aaKnown RBP24.65■■□□□ 1.54
GFRA3-202ENST00000378362 PPP1R16BQ96T49 567 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 EYSQ5T1H1 3165 aa24.65■■□□□ 1.54
GFRA3-202ENST00000378362 ZBTB39O15060 712 aa24.64■■□□□ 1.54
GFRA3-202ENST00000378362 HBP1O60381 514 aa24.64■■□□□ 1.54
GFRA3-202ENST00000378362 SLC26A2P50443 739 aa24.64■■□□□ 1.54
GFRA3-202ENST00000378362 CTTNQ14247 550 aaKnown RBP24.64■■□□□ 1.54
GFRA3-202ENST00000378362 FAM109BQ6ICB4 259 aaPredicted RBP24.64■■□□□ 1.54
GFRA3-202ENST00000378362 MTHFD1LQ6UB35 978 aa24.64■■□□□ 1.54
GFRA3-202ENST00000378362 SLFN12Q8IYM2 578 aa24.64■■□□□ 1.54
GFRA3-202ENST00000378362 CCDC155Q8N6L0 562 aa24.64■■□□□ 1.54
GFRA3-202ENST00000378362 MBLAC1A4D2B0 266 aaPredicted RBP24.63■■□□□ 1.53
GFRA3-202ENST00000378362 RSPH10B2B2RC85 870 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 RSPH10BP0C881 870 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 SYT1P21579 422 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 TECP42680 631 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 DYDC2Q96IM9 177 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 NOL7Q9UMY1 257 aaKnown RBP24.63■■□□□ 1.53
GFRA3-202ENST00000378362 TANC1Q9C0D5 1861 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 RRN3P2A6NIE6 340 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 OATP04181 439 aa24.63■■□□□ 1.53
GFRA3-202ENST00000378362 BBXQ8WY36 941 aaPredicted RBP24.63■■□□□ 1.53
GFRA3-202ENST00000378362 SEPT9Q9UHD8 586 aaPredicted RBP24.63■■□□□ 1.53
GFRA3-202ENST00000378362 GRXCR1A8MXD5 290 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 STBD1O95210 358 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 FGBP02675 491 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 CHRNA1P02708 482 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 FXR1P51114 621 aaKnown RBP eCLIP24.62■■□□□ 1.53
GFRA3-202ENST00000378362 PLA2G4FQ68DD2 849 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 METTL13Q8N6R0 699 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 C4orf32Q8N8J7 132 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 COL6A3P12111 3177 aa24.62■■□□□ 1.53
GFRA3-202ENST00000378362 DDX11L8A8MPP1 907 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 PTGDRQ13258 359 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 MTERF2Q49AM1 385 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 FAM173BQ6P4H8 233 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 LRRC71Q8N4P6 559 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 ZNF579Q8NAF0 562 aaKnown RBP24.61■■□□□ 1.53
GFRA3-202ENST00000378362 INTS4Q96HW7 963 aaKnown RBP24.61■■□□□ 1.53
GFRA3-202ENST00000378362 ZNF668Q96K58 619 aaPredicted RBP24.61■■□□□ 1.53
GFRA3-202ENST00000378362 LOXHD1Q8IVV2 1947 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 ZBBXA8MT70 800 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 OR52Z1P0C646 297 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 RBL2Q08999 1139 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 FOXD4L5Q5VV16 416 aaPredicted RBP24.61■■□□□ 1.53
GFRA3-202ENST00000378362 TPH2Q8IWU9 490 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 RPUSD2Q8IZ73 545 aaKnown RBP24.61■■□□□ 1.53
GFRA3-202ENST00000378362 RDM1Q8NG50 284 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 FOXD4L4Q8WXT5 416 aaPredicted RBP24.61■■□□□ 1.53
GFRA3-202ENST00000378362 LXNQ9BS40 222 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 GINS2Q9Y248 185 aa24.61■■□□□ 1.53
GFRA3-202ENST00000378362 HSP90AA1P07900 732 aaKnown RBP24.6■■□□□ 1.53
GFRA3-202ENST00000378362 NPEPPSP55786 919 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms