RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ABCC4O15439 1325 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 DDHD2O94830 711 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 UNC5CLQ8IV45 518 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 CEP19Q96LK0 163 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 GOLGA8QA0A0J9YX86 632 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 UBA6A0AVT1 1052 aaPredicted RBP15.16■□□□□ 0.02
TRIM13-202ENST00000378182 GOLGA8OA6NCC3 632 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 PRR23AA6NEV1 266 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 GOLGA8NF8WBI6 632 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 HOXB7P09629 217 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 PLA2G4BP0C869 781 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 ZNF507Q8TCN5 953 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 TCP11Q8WWU5 503 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 DNAJC7Q99615 494 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 BBOF1Q8ND07 529 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 ELP3Q9H9T3 547 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 CHL1O00533 1208 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 COPB1P53618 953 aaKnown RBP15.16■□□□□ 0.02
TRIM13-202ENST00000378182 PSMC5P62195 406 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 SIK2Q9H0K1 926 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 GPC3P51654 580 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 OR6J1Q8NGC5 347 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 THOC1Q96FV9 657 aaKnown RBP15.16■□□□□ 0.02
TRIM13-202ENST00000378182 ZFYVE19Q96K21 471 aa15.16■□□□□ 0.02
TRIM13-202ENST00000378182 ZSCAN9O15535 394 aaPredicted RBP15.15■□□□□ 0.02
TRIM13-202ENST00000378182 FTCDO95954 541 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 TFRCP02786 760 aaKnown RBP15.15■□□□□ 0.02
TRIM13-202ENST00000378182 HMBSP08397 361 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 LCP1P13796 627 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 ANKRD20A4Q4UJ75 823 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 ANKRD20A8PQ5CZ79 823 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 ANKRD20A2Q5SQ80 823 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 ANKRD20A1Q5TYW2 823 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 A0A1B0GUA9 196 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 PLTPP55058 493 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 EGFL8Q99944 293 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 CAPN7Q9Y6W3 813 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 IL17REQ8NFR9 667 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 EAF2Q96CJ1 260 aaPredicted RBP15.15■□□□□ 0.02
TRIM13-202ENST00000378182 CLDN3O15551 220 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 CTSHP09668 335 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 FCER1AP12319 257 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 ZC3H12BQ5HYM0 836 aaKnown RBP15.15■□□□□ 0.02
TRIM13-202ENST00000378182 PHLDB3Q6NSJ2 640 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 LRRC31Q6UY01 552 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 CCDC124Q96CT7 223 aaKnown RBP15.15■□□□□ 0.02
TRIM13-202ENST00000378182 TRIM11Q96F44 468 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 ZNF699Q32M78 642 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 PI16Q6UXB8 463 aa15.15■□□□□ 0.02
TRIM13-202ENST00000378182 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
TRIM13-202ENST00000378182 EFCAB8A8MWE9 144 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 HLA-DPA1P20036 260 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 DHX36Q9H2U1 1008 aaKnown RBP15.14■□□□□ 0.01
TRIM13-202ENST00000378182 CASS4Q9NQ75 786 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 RAD18Q9NS91 495 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 HOXC10Q9NYD6 342 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 BRD1O95696 1058 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 IL9RQ01113 521 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 ZC3H4Q9UPT8 1303 aaKnown RBP15.14■□□□□ 0.01
TRIM13-202ENST00000378182 ARHGAP25P42331 645 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 RSPH10B2B2RC85 870 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 MT-ND3P03897 115 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 RSPH10BP0C881 870 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 TMEM62Q0P6H9 643 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 PPHLN1Q8NEY8 458 aaKnown RBP15.14■□□□□ 0.01
TRIM13-202ENST00000378182 GTSE1Q9NYZ3 720 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 AFF2P51816 1311 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 KIF1BO60333 1816 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 POU5F1BQ06416 359 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 TAGAPQ8N103 731 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 BEST2Q8NFU1 509 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 KIF17Q9P2E2 1029 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 PPP1R9AQ9ULJ8 1098 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 AP1M1Q9BXS5 423 aa15.14■□□□□ 0.01
TRIM13-202ENST00000378182 SCAF8Q9UPN6 1271 aaKnown RBP15.14■□□□□ 0.01
TRIM13-202ENST00000378182 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-202ENST00000378182 TTLL4Q14679 1199 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 R3HDM1Q15032 1099 aaKnown RBP15.13■□□□□ 0.01
TRIM13-202ENST00000378182 FAM160B2Q86V87 743 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 SENP1Q9P0U3 644 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 CCDC195A0A1B0GUA6 201 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 TNPO2O14787 897 aaKnown RBP15.13■□□□□ 0.01
TRIM13-202ENST00000378182 PDIA3P30101 505 aaKnown RBP15.13■□□□□ 0.01
TRIM13-202ENST00000378182 ADCK2Q7Z695 626 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 STAG1Q8WVM7 1258 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 ANTXR1Q9H6X2 564 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 STK17AQ9UEE5 414 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 PPP2R2CQ9Y2T4 447 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 TMEM94Q12767 1356 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 BBS9Q3SYG4 887 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 FAM213AQ9BRX8 229 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 POLR3CQ9BUI4 534 aaPredicted RBP15.13■□□□□ 0.01
TRIM13-202ENST00000378182 FAN1Q9Y2M0 1017 aa15.13■□□□□ 0.01
TRIM13-202ENST00000378182 PHKA2P46019 1235 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms