RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 IGKV6D-41A0A0C4DH26 115 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 SMARCA1P28370 1054 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 BMP2KQ9NSY1 1161 aaPredicted RBP22.1■■□□□ 1.13
SHB-201ENST00000377707 CLIC2O15247 247 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 MRPL12P52815 198 aaKnown RBP22.1■■□□□ 1.13
SHB-201ENST00000377707 TCERG1LQ5VWI1 586 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 TRIM59Q8IWR1 403 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 FAM163AQ96GL9 167 aaPredicted RBP22.1■■□□□ 1.13
SHB-201ENST00000377707 KCTD10Q9H3F6 313 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 DNAJC18Q9H819 358 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 AJAP1Q9UKB5 411 aaPredicted RBP22.1■■□□□ 1.13
SHB-201ENST00000377707 PJA2O43164 708 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 MYBP10242 640 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 HOXA13P31271 388 aaPredicted RBP22.1■■□□□ 1.13
SHB-201ENST00000377707 IRAK1P51617 712 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 PTK2Q05397 1052 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 CDC42EP5Q6NZY7 148 aa22.1■■□□□ 1.13
SHB-201ENST00000377707 CCDC43Q96MW1 224 aaKnown RBP22.1■■□□□ 1.13
SHB-201ENST00000377707 SERPING1P05155 500 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 CASP4P49662 377 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 CATSPER3Q86XQ3 398 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 KSR1Q8IVT5 923 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 BCS1LQ9Y276 419 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 SMCHD1A6NHR9 2005 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 GNGT1P63211 74 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 PSMD2Q13200 908 aa22.09■■□□□ 1.13
SHB-201ENST00000377707 ADAMTSL1Q8N6G6 1762 aa22.08■■□□□ 1.13
SHB-201ENST00000377707 GDF11O95390 407 aa22.08■■□□□ 1.13
SHB-201ENST00000377707 PDCLQ13371 301 aa22.08■■□□□ 1.13
SHB-201ENST00000377707 CFAP221Q4G0U5 840 aa22.08■■□□□ 1.13
SHB-201ENST00000377707 C15orf52Q6ZUT6 534 aaKnown RBP22.08■■□□□ 1.13
SHB-201ENST00000377707 SFR1Q86XK3 245 aa22.08■■□□□ 1.13
SHB-201ENST00000377707 DDX42Q86XP3 938 aaKnown RBP eCLIP22.08■■□□□ 1.13
SHB-201ENST00000377707 CCDC65Q8IXS2 484 aa22.08■■□□□ 1.13
SHB-201ENST00000377707 GRID2IPA4D2P6 1211 aa22.08■■□□□ 1.12
SHB-201ENST00000377707 ZBTB39O15060 712 aa22.08■■□□□ 1.12
SHB-201ENST00000377707 EEF2P13639 858 aaKnown RBP22.08■■□□□ 1.12
SHB-201ENST00000377707 HOXD13P35453 343 aa22.08■■□□□ 1.12
SHB-201ENST00000377707 IKQ13123 557 aaPredicted RBP22.08■■□□□ 1.12
SHB-201ENST00000377707 ZNF571Q7Z3V5 609 aaPredicted RBP22.08■■□□□ 1.12
SHB-201ENST00000377707 AP1M1Q9BXS5 423 aa22.08■■□□□ 1.12
SHB-201ENST00000377707 ANO3Q9BYT9 981 aa22.08■■□□□ 1.12
SHB-201ENST00000377707 ZC3H12CQ9C0D7 883 aaKnown RBP22.08■■□□□ 1.12
SHB-201ENST00000377707 PPP1R1BQ9UD71 204 aaPredicted RBP22.08■■□□□ 1.12
SHB-201ENST00000377707 SSU72P8A0A1W2PR75 194 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 KCNK3O14649 394 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 MAFGO15525 162 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
SHB-201ENST00000377707 SLC18A3Q16572 532 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 KIAA0825Q8IV33 1275 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 SLF2Q8IX21 1173 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 HDAC9Q9UKV0 1011 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 PPFIA4O75335 1185 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 RPS6KA5O75582 802 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 PRLRP16471 622 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 EPHB4P54760 987 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 NAB2Q15742 525 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 CDC37Q16543 378 aaPredicted RBP22.07■■□□□ 1.12
SHB-201ENST00000377707 CASKIN2Q8WXE0 1202 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 DBNDD1Q9H9R9 158 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 RGPD3A6NKT7 1758 aaPredicted RBP22.07■■□□□ 1.12
SHB-201ENST00000377707 RGPD4Q7Z3J3 1758 aa22.07■■□□□ 1.12
SHB-201ENST00000377707 COL11A2P13942 1736 aaPredicted RBP22.06■■□□□ 1.12
SHB-201ENST00000377707 ZEB2O60315 1214 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 ASIC2Q16515 512 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 BCAS4Q8TDM0 211 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 RUFY1Q96T51 708 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 REEP2Q9BRK0 252 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 CAPS2Q9BXY5 557 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 RGL1Q9NZL6 768 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 NRXN2Q9P2S2 1712 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 DDTLA6NHG4 134 aaPredicted RBP22.06■■□□□ 1.12
SHB-201ENST00000377707 C21orf2O43822 256 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 SPICE1Q8N0Z3 855 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 RBM46Q8TBY0 533 aaKnown RBP22.06■■□□□ 1.12
SHB-201ENST00000377707 GANQ9H2C0 597 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 CENPHQ9H3R5 247 aa22.06■■□□□ 1.12
SHB-201ENST00000377707 FAM86B1E9PN63 330 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 RAD51CO43502 376 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 FAM86B2P0C5J1 330 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 RBM5P52756 815 aaKnown RBP eCLIP22.05■■□□□ 1.12
SHB-201ENST00000377707 SLC12A3P55017 1021 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 INHBEP58166 350 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 PIGOQ8TEQ8 1089 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 SPAG5Q96R06 1193 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 TMX4Q9H1E5 349 aaPredicted RBP22.05■■□□□ 1.12
SHB-201ENST00000377707 DHX36Q9H2U1 1008 aaKnown RBP22.05■■□□□ 1.12
SHB-201ENST00000377707 TMCO5BA8MYB1 307 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 MEIS2O14770 477 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 ORC2Q13416 577 aaPredicted RBP22.05■■□□□ 1.12
SHB-201ENST00000377707 SEPT2Q15019 361 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 ZNF572Q7Z3I7 529 aaPredicted RBP22.05■■□□□ 1.12
SHB-201ENST00000377707 OR2W6PQ8NHA6 318 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 PCDHB13Q9Y5F0 798 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 ARFGEF1Q9Y6D6 1849 aa22.05■■□□□ 1.12
SHB-201ENST00000377707 HSF2BPO75031 334 aa22.04■■□□□ 1.12
SHB-201ENST00000377707 AKAP3O75969 853 aa22.04■■□□□ 1.12
SHB-201ENST00000377707 UBXN2AP68543 259 aa22.04■■□□□ 1.12
SHB-201ENST00000377707 APOBEC3HQ6NTF7 200 aaKnown RBP22.04■■□□□ 1.12
SHB-201ENST00000377707 ABCB11O95342 1321 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms