RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 PPP1R16BQ96T49 567 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 PREX1Q8TCU6 1659 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 E9PMD0 336 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 CIB2O75838 187 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 RSBN1LQ6PCB5 846 aaPredicted RBP19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 XXYLT1Q8NBI6 393 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 MAGOHBQ96A72 148 aaKnown RBP19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 MMP19Q99542 508 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 NYAP2Q9P242 653 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 RNF14Q9UBS8 474 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 CLDN3O15551 220 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 NHEJ1Q9H9Q4 299 aaPredicted RBP19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 HOMER3Q9NSC5 361 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 PSPC1Q8WXF1 523 aaKnown RBP19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 TOPORSQ9NS56 1045 aaPredicted RBP19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 ZNF609O15014 1411 aa19.36■□□□□ 0.69
CLSTN1-202ENST00000377298 PSMC5P62195 406 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 STAG2Q8N3U4 1231 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 GDAP1L1Q96MZ0 367 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 SPATA31D1Q6ZQQ2 1576 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 PPFIA4O75335 1185 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 RFX5P48382 616 aaPredicted RBP19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 SLC12A6Q9UHW9 1150 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 IQSEC2Q5JU85 1478 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 HSPA6P17066 643 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 GOLGA8FQ08AF8 430 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 GOLGA8DPQ0D2H9 430 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 PRPSAP1Q14558 356 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 R3HDM1Q15032 1099 aaKnown RBP19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 CEP85LQ5SZL2 805 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 SLC38A10Q9HBR0 1119 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 POTEB3A0JP26 581 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 POTECB2RU33 542 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 CD58P19256 250 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 NAA35Q5VZE5 725 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 POTEBQ6S5H4 581 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 THNSL1Q8IYQ7 743 aa19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 FMR1NBQ8N0W7 255 aaPredicted RBP19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 SRBD1Q8N5C6 995 aaKnown RBP19.35■□□□□ 0.69
CLSTN1-202ENST00000377298 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 WDR46O15213 610 aaKnown RBP19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 ZNF543Q08ER8 600 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 NFX1Q12986 1120 aaKnown RBP19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 CDC42EP5Q6NZY7 148 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 DDX23Q9BUQ8 820 aaKnown RBP19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 ZNF667Q5HYK9 610 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 C2orf40Q9H1Z8 148 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 C19orf81C9J6K1 198 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 NR3C1P04150 777 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 HMGCS2P54868 508 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 MTRQ99707 1265 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 ASB14A6NK59 587 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 NDUFA10O95299 355 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 OAS2P29728 719 aaKnown RBP19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 STX2P32856 288 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 COASYQ13057 564 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 COG2Q14746 738 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 FAM151AQ8WW52 585 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 PFDN4Q9NQP4 134 aa19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 ZNF70Q9UC06 446 aaPredicted RBP19.34■□□□□ 0.69
CLSTN1-202ENST00000377298 PGRMC1O00264 195 aaKnown RBP19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 ARL4AP40617 200 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 ATP2C1P98194 919 aaPredicted RBP19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 TTBK2Q6IQ55 1244 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 VSIG1Q86XK7 387 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 SIX6OS1Q8N1H7 587 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 GABBR1Q9UBS5 961 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 HOXD10P28358 340 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 OR6B2Q6IFH4 312 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 RABGGTAQ92696 567 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 HEXIM2Q96MH2 286 aaKnown RBP19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 JRKLQ9Y4A0 524 aa19.33■□□□□ 0.69
CLSTN1-202ENST00000377298 ATP1A3P13637 1013 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 KCNV1Q6PIU1 500 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 STMN2Q93045 179 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 FAM114A2Q9NRY5 505 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 SWSAP1Q6NVH7 229 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 CCDC62Q6P9F0 684 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 DSTYKQ6XUX3 929 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 PBKQ96KB5 322 aa19.33■□□□□ 0.68
CLSTN1-202ENST00000377298 TDP2O95551 362 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 GUCY2DQ02846 1103 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 PPP2R5CQ13362 524 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 SLC15A2Q16348 729 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 C16orf86Q6ZW13 317 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 CDKL2Q92772 493 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 CABS1Q96KC9 395 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 AFG3L2Q9Y4W6 797 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 RIMS1Q86UR5 1692 aaKnown RBP19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 ENC1O14682 589 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 RNF40O75150 1001 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 APBA1Q02410 837 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 LRRIQ1Q96JM4 1722 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 EPHA7Q15375 998 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 CEP55Q53EZ4 464 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 IGDCC4Q8TDY8 1250 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 IPO11Q9UI26 975 aaKnown RBP19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 PTPN21Q16825 1174 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 SARM1Q6SZW1 724 aa19.32■□□□□ 0.68
CLSTN1-202ENST00000377298 GOLGA8KD6RF30 607 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms