RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 TNIP1Q15025 636 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 LRRC55Q6ZSA7 311 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 FAM196AQ6ZSG2 479 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 CPNE8Q86YQ8 564 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 GDAP1Q8TB36 358 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 ANKRD2Q9GZV1 360 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 GOLGA8IPA6NC78 632 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 GOLGA8JA6NMD2 632 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 TUBB4BP68371 445 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 NFIAQ12857 509 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-202ENST00000375597 MMGT1Q8N4V1 131 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 CUL5Q93034 780 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 CTTNBP2NLQ9P2B4 639 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 DDX60Q8IY21 1712 aaKnown RBP12.87□□□□□ -0.35
MCF2L-202ENST00000375597 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 SEPT14Q6ZU15 432 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 ZFPM1Q8IX07 1006 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 MYCBPAPQ8TBZ2 947 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 KCNQ5Q9NR82 932 aa12.87□□□□□ -0.35
MCF2L-202ENST00000375597 COL4A1P02462 1669 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 NOL4O94818 638 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 UPP2O95045 317 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 ACSL3O95573 720 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 RCAN1P53805 252 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 EPC2Q52LR7 807 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 KCNV1Q6PIU1 500 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 TBC1D1Q86TI0 1168 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-202ENST00000375597 GUF1Q8N442 669 aaKnown RBP12.86□□□□□ -0.35
MCF2L-202ENST00000375597 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
MCF2L-202ENST00000375597 FAM13AO94988 1023 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 UCHL3P15374 230 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 DAB2IPQ5VWQ8 1189 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 HIBCHQ6NVY1 386 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-202ENST00000375597 AK8Q96MA6 479 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 ELAC2Q9BQ52 826 aaKnown RBP12.86□□□□□ -0.35
MCF2L-202ENST00000375597 REEP2Q9BRK0 252 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 JMJD4Q9H9V9 463 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 EFCC1Q9HA90 598 aa12.86□□□□□ -0.35
MCF2L-202ENST00000375597 PPP1R11O60927 126 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 SHBGP04278 402 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 H2AFZP0C0S5 128 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 PLCG2P16885 1265 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 NAA25Q14CX7 972 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 SLC18A3Q16572 532 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 H2AFVQ71UI9 128 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 B4GALNT4Q76KP1 1039 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 ANKS1AQ92625 1134 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 DDX4Q9NQI0 724 aaKnown RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 TAS2R14Q9NYV8 317 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 AKAP3O75969 853 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 KIF4AO95239 1232 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 MDH1P40925 334 aaKnown RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 PTGISQ16647 500 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 KIF2BQ8N4N8 673 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 CEP89Q96ST8 783 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 CEP72Q9P209 647 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 CNOT8Q9UFF9 292 aaKnown RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 USP38Q8NB14 1042 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 CYFIP2Q96F07 1278 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 SLC24A3Q9HC58 644 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 PLCB1Q9NQ66 1216 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 UTP11Q9Y3A2 253 aaKnown RBP12.85□□□□□ -0.35
MCF2L-202ENST00000375597 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
MCF2L-202ENST00000375597 PIAS1O75925 651 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 FECHP22830 423 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 GSTO1P78417 241 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 QRICH1Q2TAL8 776 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 CCDC13Q8IYE1 715 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 HAS1Q92839 578 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
MCF2L-202ENST00000375597 TAF1DQ9H5J8 278 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-202ENST00000375597 AZI2Q9H6S1 392 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 DNM3Q9UQ16 869 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 TMEM150BA6NC51 233 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 CAND2O75155 1236 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 GALCP54803 685 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 USP20Q9Y2K6 914 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 MYH7P12883 1935 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
MCF2L-202ENST00000375597 POLD1P28340 1107 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 LRRC63Q05C16 580 aa12.84□□□□□ -0.35
MCF2L-202ENST00000375597 SF3B3Q15393 1217 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms