RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 BMT2Q1RMZ1 405 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 TBC1D5Q92609 795 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 TEPSINQ96N21 525 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 MXRA8Q9BRK3 442 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 AS3MTQ9HBK9 375 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 FBXO28Q9NVF7 368 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 SEL1LQ9UBV2 794 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 CDC23Q9UJX2 597 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.03□□□□□ -0.96
UBR4-202ENST00000375224 CCDC189A1A4V9 331 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 NFKBIEO00221 500 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 FAM13AO94988 1023 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
UBR4-202ENST00000375224 ARHGAP25P42331 645 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 EPS15P42566 896 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 CYP4A11Q02928 519 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
UBR4-202ENST00000375224 ERCC6LQ2NKX8 1250 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 CACNA2D4Q7Z3S7 1137 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 FRMD5Q7Z6J6 570 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 NELFCDQ8IXH7 590 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 GLIS3Q8NEA6 775 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 FAM210AQ96ND0 272 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 METTL14Q9HCE5 456 aaKnown RBP9.03□□□□□ -0.96
UBR4-202ENST00000375224 OLFML3Q9NRN5 406 aa9.03□□□□□ -0.96
UBR4-202ENST00000375224 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.03□□□□□ -0.96
UBR4-202ENST00000375224 V9GYY5 206 aaPredicted RBP9.03□□□□□ -0.96
UBR4-202ENST00000375224 SMCHD1A6NHR9 2005 aa9.02□□□□□ -0.96
UBR4-202ENST00000375224 EML1O00423 815 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 FANCGO15287 622 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 EIF3DO15371 548 aaKnown RBP eCLIP9.02□□□□□ -0.972e-7■■■□□ 17.1
UBR4-202ENST00000375224 USO1O60763 962 aaKnown RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 ZBED4O75132 1171 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 SLITRK3O94933 977 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 INPP5BP32019 993 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 KLK7P49862 253 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 EPM2AIP1Q7L775 607 aaPredicted RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 SFR1Q86XK3 245 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 TRIM59Q8IWR1 403 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 TPH2Q8IWU9 490 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 SLC35F6Q8N357 371 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 FBXO41Q8TF61 875 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 SYN2Q92777 582 aaPredicted RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 GOLGA1Q92805 767 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 DYDC2Q96IM9 177 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 GLIS2Q9BZE0 524 aaPredicted RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 TYW1Q9NV66 732 aaKnown RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 UBE4BO95155 1302 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 NEBLO76041 1014 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 IVLP07476 585 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 GSCP56915 257 aaPredicted RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 CACNB1Q02641 598 aaPredicted RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 CCDC122Q5T0U0 273 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 RINT1Q6NUQ1 792 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 MICALL2Q8IY33 904 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 GPR161Q8N6U8 529 aaKnown RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 RGL1Q9NZL6 768 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 CEP72Q9P209 647 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.97
UBR4-202ENST00000375224 ODF2LQ9ULJ1 636 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 RPTORQ8N122 1335 aa9.02□□□□□ -0.97
UBR4-202ENST00000375224 IPO5O00410 1097 aaKnown RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 SLC16A3O15427 465 aaKnown RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 NR2F2P24468 414 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 GMPSP49915 693 aaPredicted RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 WHAMMP3Q1A5X7 153 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 MMS22LQ6ZRQ5 1243 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 APOBEC3FQ8IUX4 373 aaKnown RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 GOLGA5Q8TBA6 731 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 JAKMIP2Q96AA8 810 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 SLC38A10Q9HBR0 1119 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 LUC7LQ9NQ29 371 aaKnown RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 FAM207AQ9NSI2 230 aaPredicted RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 BCS1LQ9Y276 419 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 ZNF536O15090 1300 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 POTEB2H3BUK9 544 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 FZD9O00144 591 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 MAFGO15525 162 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 KIF5AQ12840 1032 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 CTTNQ14247 550 aaKnown RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 AP1ARQ63HQ0 302 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 SRGAP1Q7Z6B7 1085 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 RABGGTAQ92696 567 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 CEP89Q96ST8 783 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 IRX2Q9BZI1 471 aaPredicted RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 PARVGQ9HBI0 331 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 ZNF446Q9NWS9 450 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 CPSF2Q9P2I0 782 aaKnown RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 PPP1R1BQ9UD71 204 aaPredicted RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 ARMCX3Q9UH62 379 aaPredicted RBP9.01□□□□□ -0.97
UBR4-202ENST00000375224 LCMT1Q9UIC8 334 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 HACL1Q9UJ83 578 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 PPP1R9AQ9ULJ8 1098 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 GUCA1BQ9UMX6 200 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 CHMP2AO43633 222 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 FLOT1O75955 427 aa9.01□□□□□ -0.97
UBR4-202ENST00000375224 GCNT3O95395 438 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms