RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TBC1D8O95759 1140 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 RHOXF2BP0C7M4 288 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 HTR3AP46098 478 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 GSCP56915 257 aaPredicted RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 MVPQ14764 893 aaKnown RBP9.91□□□□□ -0.82
UBR4-201ENST00000375218 CNSTQ6PJW8 725 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 SLC51AQ86UW1 340 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 ANKMY2Q8IV38 441 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 SLC16A10Q8TF71 515 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 TTC25Q96NG3 672 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 RHOXF2Q9BQY4 288 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 COQ3Q9NZJ6 369 aa9.91□□□□□ -0.82
UBR4-201ENST00000375218 MYH3P11055 1940 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 ERLIN1O75477 346 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 EIF4BP23588 611 aaKnown RBP9.9□□□□□ -0.82
UBR4-201ENST00000375218 RAC1P63000 192 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 IL1RL1Q01638 556 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 EPHX4Q8IUS5 362 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 FAM186BQ8IYM0 893 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 BAP1Q92560 729 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 HDAC6Q9UBN7 1215 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 CRYL1Q9Y2S2 319 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 NOSIPQ9Y314 301 aaKnown RBP9.9□□□□□ -0.82
UBR4-201ENST00000375218 POTEIP0CG38 1075 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 IDUAP35475 653 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 ZNF579Q8NAF0 562 aaKnown RBP9.9□□□□□ -0.82
UBR4-201ENST00000375218 MDM1Q8TC05 714 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 FNIP1Q8TF40 1166 aa9.9□□□□□ -0.82
UBR4-201ENST00000375218 FRMPD2Q68DX3 1309 aaPredicted RBP9.9□□□□□ -0.83
UBR4-201ENST00000375218 ANXA1P04083 346 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 RANBP1P43487 201 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 USP4Q13107 963 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 PDE3AQ14432 1141 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 ATF7IPQ6VMQ6 1270 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 GALNTL5Q7Z4T8 443 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 FAM174AQ8TBP5 190 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 FATE1Q969F0 183 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 ABCF3Q9NUQ8 709 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 PTBP2Q9UKA9 531 aaKnown RBP9.9□□□□□ -0.83
UBR4-201ENST00000375218 HPCAL4Q9UM19 191 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 ZNF711Q9Y462 761 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 PTCH2Q9Y6C5 1203 aa9.9□□□□□ -0.83
UBR4-201ENST00000375218 KLRG2A4D1S0 409 aaPredicted RBP9.89□□□□□ -0.83
UBR4-201ENST00000375218 CAVIN2O95810 425 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 ATP5DP30049 168 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 SGCGQ13326 291 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 LAPTM5Q13571 262 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 KRT26Q7Z3Y9 468 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 CEP97Q8IW35 865 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 TRPM4Q8TD43 1214 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 ANKRD7Q92527 254 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 KCNN1Q92952 543 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 SEC62Q99442 399 aaKnown RBP9.89□□□□□ -0.83
UBR4-201ENST00000375218 MMADHCQ9H3L0 296 aaPredicted RBP9.89□□□□□ -0.83
UBR4-201ENST00000375218 C17orf113A0A1B0GUU1 675 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 ABHD14A-ACY1A0A1B0GW23 586 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 LSM1O15116 133 aaKnown RBP9.89□□□□□ -0.83
UBR4-201ENST00000375218 KLF4O43474 513 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 NPPAP01160 153 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 CAVIN4Q5BKX8 364 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 ZNF606Q8WXB4 792 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
UBR4-201ENST00000375218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.89□□□□□ -0.83
UBR4-201ENST00000375218 PCDHB9Q9Y5E1 797 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 AP3B1O00203 1094 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 DYNC1I1O14576 645 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 MAP3K9P80192 1104 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 PPARDQ03181 441 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 NEDD9Q14511 834 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 ANKRD39Q53RE8 183 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 LIN54Q6MZP7 749 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 MPRIPQ6WCQ1 1025 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 SPATA2LQ8IUW3 424 aaPredicted RBP9.89□□□□□ -0.83
UBR4-201ENST00000375218 RFWD2Q8NHY2 731 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 CREBZFQ9NS37 354 aa9.89□□□□□ -0.83
UBR4-201ENST00000375218 LACTBL1A8MY62 500 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 STX6O43752 255 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 AP3B2Q13367 1082 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 TCEA2Q15560 299 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 SLC5A9Q2M3M2 681 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 SPATC1Q76KD6 591 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 TTC17Q96AE7 1141 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 PPP1R14BQ96C90 147 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 GPR52Q9Y2T5 361 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 ACTN2P35609 894 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 HDAC4P56524 1084 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 IGF2-ASQ6U949 168 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 SH3BP5LQ7L8J4 393 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 NIM1KQ8IY84 436 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 SYTL1Q8IYJ3 562 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 SPERTQ8NA61 448 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 RBM17Q96I25 401 aaKnown RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 TMEM237Q96Q45 408 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 UNKQ9C0B0 810 aaKnown RBP9.88□□□□□ -0.83
UBR4-201ENST00000375218 CCDC87Q9NVE4 849 aa9.88□□□□□ -0.83
UBR4-201ENST00000375218 TRHDEQ9UKU6 1024 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms