RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 WDR11Q9BZH6 1224 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 SLC38A10Q9HBR0 1119 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 EPB41L5Q9HCM4 733 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 PRDM5Q9NQX1 630 aaPredicted RBP15.43■□□□□ 0.06
TRAF1-201ENST00000373887 ITM2BQ9Y287 266 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 NEDD4P46934 1319 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 HMGB1P1B2RPK0 211 aaPredicted RBP15.43■□□□□ 0.06
TRAF1-201ENST00000373887 MAP3K7O43318 606 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 PLTPP55058 493 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 NSUN7Q8NE18 718 aaKnown RBP15.43■□□□□ 0.06
TRAF1-201ENST00000373887 SSH2Q76I76 1423 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 CXCR5P32302 372 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 BASP1P80723 227 aaKnown RBP15.43■□□□□ 0.06
TRAF1-201ENST00000373887 CYTH2Q99418 400 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 SLC4A7Q9Y6M7 1214 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 KRT1P04264 644 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 MAPK4P31152 587 aa15.43■□□□□ 0.06
TRAF1-201ENST00000373887 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
TRAF1-201ENST00000373887 HEXIM1O94992 359 aaKnown RBP15.42■□□□□ 0.06
TRAF1-201ENST00000373887 KRT10P13645 584 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 MAP7D3Q8IWC1 876 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 NT5C1BQ96P26 610 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 STAP2Q9UGK3 403 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 POLR3CQ9BUI4 534 aaPredicted RBP15.42■□□□□ 0.06
TRAF1-201ENST00000373887 EIF2AQ9BY44 585 aaKnown RBP15.42■□□□□ 0.06
TRAF1-201ENST00000373887 CASP14P31944 242 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 YWHAHQ04917 246 aaPredicted RBP15.42■□□□□ 0.06
TRAF1-201ENST00000373887 PTK2Q05397 1052 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 SGO2Q562F6 1265 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 ZNF449Q6P9G9 518 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 DEPDC1BQ8WUY9 529 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 PPP1R13BQ96KQ4 1090 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 RMDN3Q96TC7 470 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 FOXP1Q9H334 677 aaPredicted RBP15.42■□□□□ 0.06
TRAF1-201ENST00000373887 MED4Q9NPJ6 270 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 EPN1Q9Y6I3 576 aaPredicted RBP15.42■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L10C9JJH3 530 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 H3BRJ5 948 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 MMP1P03956 469 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 MFAP3P55082 362 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 DSTYKQ6XUX3 929 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 NUDCD3Q8IVD9 361 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 TRIM59Q8IWR1 403 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 MAML1Q92585 1016 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 MIS12Q9H081 205 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 PCDHB6Q9Y5E3 794 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 CRB1P82279 1406 aa15.42■□□□□ 0.06
TRAF1-201ENST00000373887 TYW5A2RUC4 315 aaKnown RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 SYNDIG1LA6NDD5 238 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 SOX5P35711 763 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 ARHGDIAP52565 204 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 DARS2Q6PI48 645 aaKnown RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 MICALL2Q8IY33 904 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 FAM186BQ8IYM0 893 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 JPH2Q9BR39 696 aaPredicted RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 MYO1FO00160 1098 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 HIPK4Q8NE63 616 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 ZC4H2Q9NQZ6 224 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 CAPN11Q9UMQ6 739 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 RRP15Q9Y3B9 282 aaKnown RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 JCADQ9P266 1359 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L15C9J2P7 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L13C9JLJ4 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L11C9JVI0 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L18D6R9N7 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L22D6RA61 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L17D6RBQ6 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L19D6RCP7 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L20D6RJB6 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 PTPREP23469 700 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 PSMC2P35998 433 aaKnown RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 COPB1P53618 953 aaKnown RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L24Q0WX57 530 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 USP17L6PQ6QN14 398 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 SZRD1Q7Z422 152 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 MMP19Q99542 508 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 HAUS4Q9H6D7 363 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 SKIV2LQ15477 1246 aaKnown RBP15.41■□□□□ 0.06
TRAF1-201ENST00000373887 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 GJB4Q9NTQ9 266 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 PEX3P56589 373 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 MTMR1Q13613 665 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 ARHGEF18Q6ZSZ5 1173 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 CATSPER4Q7RTX7 472 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 SCOCQ9UIL1 159 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 PCDHA6Q9UN73 950 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 PCDHA8Q9Y5H6 950 aa15.41■□□□□ 0.06
TRAF1-201ENST00000373887 TRIM67Q6ZTA4 783 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 BBS5Q8N3I7 341 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 THOC1Q96FV9 657 aaKnown RBP15.4■□□□□ 0.06
TRAF1-201ENST00000373887 HACD3Q9P035 362 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 TLK1Q9UKI8 766 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 SCINQ9Y6U3 715 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 HEXIM2Q96MH2 286 aaKnown RBP15.4■□□□□ 0.06
TRAF1-201ENST00000373887 EFHD1Q9BUP0 239 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 HOXC10Q9NYD6 342 aa15.4■□□□□ 0.06
TRAF1-201ENST00000373887 SLC13A4Q9UKG4 626 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms