RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 HMGCS2P54868 508 aa22.15■■□□□ 1.14
SRSF4-201ENST00000373795 RPS6P62753 249 aaKnown RBP22.15■■□□□ 1.14
SRSF4-201ENST00000373795 MEA1Q16626 185 aa22.15■■□□□ 1.14
SRSF4-201ENST00000373795 MAN2A1Q16706 1144 aa22.15■■□□□ 1.14
SRSF4-201ENST00000373795 MCF2L2Q86YR7 1114 aa22.15■■□□□ 1.14
SRSF4-201ENST00000373795 VWA5AO00534 786 aa22.14■■□□□ 1.14
SRSF4-201ENST00000373795 MYBP10242 640 aa22.14■■□□□ 1.14
SRSF4-201ENST00000373795 HOXD13P35453 343 aa22.14■■□□□ 1.14
SRSF4-201ENST00000373795 USP14P54578 494 aa22.14■■□□□ 1.14
SRSF4-201ENST00000373795 MRPS9P82933 396 aaKnown RBP22.14■■□□□ 1.14
SRSF4-201ENST00000373795 TRAPPC11Q7Z392 1133 aa22.14■■□□□ 1.14
SRSF4-201ENST00000373795 NEK11Q8NG66 645 aa22.14■■□□□ 1.14
SRSF4-201ENST00000373795 TUFT1Q9NNX1 390 aa22.14■■□□□ 1.14
SRSF4-201ENST00000373795 CTDP1Q9Y5B0 961 aaPredicted RBP22.14■■□□□ 1.14
SRSF4-201ENST00000373795 RPTORQ8N122 1335 aa22.14■■□□□ 1.13
SRSF4-201ENST00000373795 RCCD1A6NED2 376 aa22.14■■□□□ 1.13
SRSF4-201ENST00000373795 EPHB6O15197 1021 aa22.14■■□□□ 1.13
SRSF4-201ENST00000373795 ATP1A1P05023 1023 aaKnown RBP22.14■■□□□ 1.13
SRSF4-201ENST00000373795 EIF2AK2P19525 551 aaKnown RBP22.14■■□□□ 1.13
SRSF4-201ENST00000373795 HOXA7P31268 230 aaPredicted RBP22.14■■□□□ 1.13
SRSF4-201ENST00000373795 SETQ01105 290 aaPredicted RBP22.14■■□□□ 1.13
SRSF4-201ENST00000373795 APOBEC3FQ8IUX4 373 aaKnown RBP22.14■■□□□ 1.13
SRSF4-201ENST00000373795 TRERF1Q96PN7 1200 aa22.14■■□□□ 1.13
SRSF4-201ENST00000373795 PDE11AQ9HCR9 933 aa22.14■■□□□ 1.13
SRSF4-201ENST00000373795 L1RE1Q9UN81 338 aa22.14■■□□□ 1.13
SRSF4-201ENST00000373795 COL4A3BPQ9Y5P4 624 aa22.14■■□□□ 1.13
SRSF4-201ENST00000373795 SRGAP2O75044 1071 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 ZBED4O75132 1171 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 PRPF6O94906 941 aaKnown RBP22.13■■□□□ 1.13
SRSF4-201ENST00000373795 TUBB4BP68371 445 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 HDXQ7Z353 690 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 KIAA1328Q86T90 577 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 BANK1Q8NDB2 785 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 NUP58Q9BVL2 599 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 TEKT3Q9BXF9 490 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 LACRTQ9GZZ8 138 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 FAM207AQ9NSI2 230 aaPredicted RBP22.13■■□□□ 1.13
SRSF4-201ENST00000373795 DOCK1Q14185 1865 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 ERLIN1O75477 346 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 ADAM9Q13443 819 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 B3GNT9Q6UX72 402 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 NHEJ1Q9H9Q4 299 aaPredicted RBP22.13■■□□□ 1.13
SRSF4-201ENST00000373795 SIK3Q9Y2K2 1263 aa22.13■■□□□ 1.13
SRSF4-201ENST00000373795 RBBP6Q7Z6E9 1792 aaKnown RBP22.13■■□□□ 1.13
SRSF4-201ENST00000373795 CCDC40Q4G0X9 1142 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 FOXR2Q6PJQ5 311 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 C1orf186Q6ZWK4 172 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 GPC2Q8N158 579 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 UPF1Q92900 1129 aaKnown RBP eCLIP22.12■■□□□ 1.13
SRSF4-201ENST00000373795 KLRG1Q96E93 195 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 MMRN2Q9H8L6 949 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 KRT83P78385 493 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 KCNA1Q09470 495 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 TAF3Q5VWG9 929 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 NSMFQ6X4W1 530 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 SMCR8Q8TEV9 937 aaPredicted RBP22.12■■□□□ 1.13
SRSF4-201ENST00000373795 JAKMIP2Q96AA8 810 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 AS3MTQ9HBK9 375 aa22.12■■□□□ 1.13
SRSF4-201ENST00000373795 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
SRSF4-201ENST00000373795 ZNHIT6Q9NWK9 470 aaKnown RBP22.12■■□□□ 1.13
SRSF4-201ENST00000373795 DHX15O43143 795 aaKnown RBP22.11■■□□□ 1.13
SRSF4-201ENST00000373795 MYCLP12524 364 aaPredicted RBP22.11■■□□□ 1.13
SRSF4-201ENST00000373795 LMNB1P20700 586 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 ZBED6P86452 979 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 EPHA7Q15375 998 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 TKFCQ3LXA3 575 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 EPM2AIP1Q7L775 607 aaPredicted RBP22.11■■□□□ 1.13
SRSF4-201ENST00000373795 RETREG2Q8NC44 543 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 LXNQ9BS40 222 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 DUSP10Q9Y6W6 482 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 CYLC1P35663 651 aaPredicted RBP22.11■■□□□ 1.13
SRSF4-201ENST00000373795 CYP27A1Q02318 531 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 GHRHRQ02643 423 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 ITGB3BPQ13352 177 aaPredicted RBP22.11■■□□□ 1.13
SRSF4-201ENST00000373795 KRT26Q7Z3Y9 468 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 GPIHBP1Q8IV16 184 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 MMS19Q96T76 1030 aa22.11■■□□□ 1.13
SRSF4-201ENST00000373795 TBCAO75347 108 aaKnown RBP22.1■■□□□ 1.13
SRSF4-201ENST00000373795 DDNO94850 711 aaPredicted RBP22.1■■□□□ 1.13
SRSF4-201ENST00000373795 PCNX4Q63HM2 1172 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 RNF207Q6ZRF8 634 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 CAPZA3Q96KX2 299 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 RIT2Q99578 217 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 IKZF4Q9H2S9 585 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 UBIAD1Q9Y5Z9 338 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 SAR1BQ9Y6B6 198 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 N4BP1O75113 896 aaKnown RBP22.1■■□□□ 1.13
SRSF4-201ENST00000373795 PGM5Q15124 567 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 KNOP1Q1ED39 458 aaKnown RBP22.1■■□□□ 1.13
SRSF4-201ENST00000373795 CEP63Q96MT8 703 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 NACC1Q96RE7 527 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 RMDN3Q96TC7 470 aa22.1■■□□□ 1.13
SRSF4-201ENST00000373795 PARP14Q460N5 1801 aa22.09■■□□□ 1.13
SRSF4-201ENST00000373795 KRT86O43790 486 aa22.09■■□□□ 1.13
SRSF4-201ENST00000373795 GCNT3O95395 438 aa22.09■■□□□ 1.13
SRSF4-201ENST00000373795 BCRP11274 1271 aa22.09■■□□□ 1.13
SRSF4-201ENST00000373795 NR2F2P24468 414 aa22.09■■□□□ 1.13
SRSF4-201ENST00000373795 KCNMA1Q12791 1236 aa22.09■■□□□ 1.13
SRSF4-201ENST00000373795 MYCT1Q8N699 235 aa22.09■■□□□ 1.13
SRSF4-201ENST00000373795 AGO4Q9HCK5 861 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms