RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 P4HBP07237 508 aaKnown RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ZNF131P52739 623 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 NCBP1Q09161 790 aaKnown RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 KCNMA1Q12791 1236 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 NAA30Q147X3 362 aaPredicted RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ZNF397Q8NF99 534 aaPredicted RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 SMCR8Q8TEV9 937 aaPredicted RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 PARVGQ9HBI0 331 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ADARB2Q9NS39 739 aaKnown RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 TBC1D22BQ9NU19 505 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ASTN1O14525 1302 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ATP2A1O14983 1001 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 CASQ1P31415 396 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 KCNA1Q09470 495 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ZSWIM4Q9H7M6 989 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 TYW1Q9NV66 732 aaKnown RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ZNHIT6Q9NWK9 470 aaKnown RBP21.61■■□□□ 1.05
HDAC1-201ENST00000373548 RNF181Q9P0P0 153 aa21.61■■□□□ 1.05
HDAC1-201ENST00000373548 ARHGEF35A5YM69 484 aa21.6■■□□□ 1.05
HDAC1-201ENST00000373548 NMT1P30419 496 aaKnown RBP21.6■■□□□ 1.05
HDAC1-201ENST00000373548 ARHGAP25P42331 645 aa21.6■■□□□ 1.05
HDAC1-201ENST00000373548 VGLL4Q14135 290 aa21.6■■□□□ 1.05
HDAC1-201ENST00000373548 SH3D19Q5HYK7 790 aa21.6■■□□□ 1.05
HDAC1-201ENST00000373548 FIZ1Q96SL8 496 aa21.6■■□□□ 1.05
HDAC1-201ENST00000373548 ODF2LQ9ULJ1 636 aa21.6■■□□□ 1.05
HDAC1-201ENST00000373548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.6■■□□□ 1.05
HDAC1-201ENST00000373548 KIAA1217Q5T5P2 1943 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 SPDYE16A6NNV3 312 aaPredicted RBP21.59■■□□□ 1.05
HDAC1-201ENST00000373548 EIF3DO15371 548 aaKnown RBP eCLIP21.59■■□□□ 1.05
HDAC1-201ENST00000373548 CALUO43852 315 aaPredicted RBP21.59■■□□□ 1.05
HDAC1-201ENST00000373548 ATP9AO75110 1047 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 URI1O94763 535 aaPredicted RBP21.59■■□□□ 1.05
HDAC1-201ENST00000373548 ABL1P00519 1130 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 GUCY2CP25092 1073 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 ERO1AQ96HE7 468 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 TEX13BQ9BXU2 312 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 SEL1LQ9UBV2 794 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 ADM5C9JUS6 153 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 HNRNPH3P31942 346 aaKnown RBP21.59■■□□□ 1.05
HDAC1-201ENST00000373548 CDK17Q00537 523 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 ARHGAP29Q52LW3 1261 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 XRRA1Q6P2D8 792 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 ANKRD7Q92527 254 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 FAM184BQ9ULE4 1060 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 SAMM50Q9Y512 469 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 ZMYM2Q9UBW7 1377 aa21.59■■□□□ 1.05
HDAC1-201ENST00000373548 LOC285556D6RIA3 1793 aa21.58■■□□□ 1.05
HDAC1-201ENST00000373548 TESPA1A2RU30 521 aaPredicted RBP21.58■■□□□ 1.05
HDAC1-201ENST00000373548 MAP3K9P80192 1104 aa21.58■■□□□ 1.05
HDAC1-201ENST00000373548 MAPK7Q13164 816 aa21.58■■□□□ 1.05
HDAC1-201ENST00000373548 VSIG10LQ86VR7 867 aa21.58■■□□□ 1.05
HDAC1-201ENST00000373548 PLAGL2Q9UPG8 496 aa21.58■■□□□ 1.05
HDAC1-201ENST00000373548 MYPNQ86TC9 1320 aa21.58■■□□□ 1.05
HDAC1-201ENST00000373548 TGFB1I1O43294 461 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 KIF5CO60282 957 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 NR3C1P04150 777 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 NR3C2P08235 984 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 CCND2P30279 289 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 QARSP47897 775 aaKnown RBP21.58■■□□□ 1.04
HDAC1-201ENST00000373548 ZC2HC1CQ53FD0 456 aaPredicted RBP21.58■■□□□ 1.04
HDAC1-201ENST00000373548 PADI6Q6TGC4 694 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 DAW1Q8N136 415 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 RBM46Q8TBY0 533 aaKnown RBP21.58■■□□□ 1.04
HDAC1-201ENST00000373548 BAP1Q92560 729 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 DCPSQ96C86 337 aaKnown RBP21.58■■□□□ 1.04
HDAC1-201ENST00000373548 NHEJ1Q9H9Q4 299 aaPredicted RBP21.58■■□□□ 1.04
HDAC1-201ENST00000373548 HOXC10Q9NYD6 342 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 LCTP09848 1927 aa21.58■■□□□ 1.04
HDAC1-201ENST00000373548 WDR81Q562E7 1941 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 LYPLA2O95372 231 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 CCNE2O96020 404 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 HERVK_113P62684 666 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 ZNF720Q7Z2F6 126 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 FRMD5Q7Z6J6 570 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 LRRN4CLQ8ND94 238 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 NEK11Q8NG66 645 aa21.57■■□□□ 1.04
HDAC1-201ENST00000373548 DBR1Q9UK59 544 aaKnown RBP21.57■■□□□ 1.04
HDAC1-201ENST00000373548 HIP1RO75146 1068 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 SULF1Q8IWU6 871 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 FAM178BQ8IXR5 827 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 CCDC170Q8IYT3 715 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 EDEM3Q9BZQ6 932 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 IKZF4Q9H2S9 585 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 ACAD9Q9H845 621 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 A1CFQ9NQ94 594 aaKnown RBP21.56■■□□□ 1.04
HDAC1-201ENST00000373548 CYP39A1Q9NYL5 469 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 ARMCX3Q9UH62 379 aaPredicted RBP21.56■■□□□ 1.04
HDAC1-201ENST00000373548 AKAP3O75969 853 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 CYLC1P35663 651 aaPredicted RBP21.56■■□□□ 1.04
HDAC1-201ENST00000373548 PLS1Q14651 629 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 UGCGQ16739 394 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 ODR4Q5SWX8 454 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
HDAC1-201ENST00000373548 CNKSR2Q8WXI2 1034 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 GPRASP2Q96D09 838 aa21.56■■□□□ 1.04
HDAC1-201ENST00000373548 UBE4BO95155 1302 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 LRRC53A6NM62 1247 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 CLIC2O15247 247 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 NOL4O94818 638 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms