RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TRAF3IP3Q9Y228 551 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 RBAK-RBAKDNI3L0D1 243 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 SLITRK3O94933 977 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 KLHL30Q0D2K2 578 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 COG2Q14746 738 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 OTOP1Q7RTM1 612 aa26.19■■□□□ 1.78
CDK9-201ENST00000373264 PALMO75781 387 aa26.18■■□□□ 1.78
CDK9-201ENST00000373264 KCTD19Q17RG1 926 aaPredicted RBP26.18■■□□□ 1.78
CDK9-201ENST00000373264 ALS2CR12Q96Q35 445 aa26.18■■□□□ 1.78
CDK9-201ENST00000373264 GBP3Q9H0R5 595 aa26.18■■□□□ 1.78
CDK9-201ENST00000373264 GOLPH3Q9H4A6 298 aa26.18■■□□□ 1.78
CDK9-201ENST00000373264 ZNF70Q9UC06 446 aaPredicted RBP26.18■■□□□ 1.78
CDK9-201ENST00000373264 PCDHB13Q9Y5F0 798 aa26.18■■□□□ 1.78
CDK9-201ENST00000373264 NR3C1P04150 777 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 RBM46Q8TBY0 533 aaKnown RBP26.17■■□□□ 1.78
CDK9-201ENST00000373264 HSD17B14Q9BPX1 270 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 ZNF277Q9NRM2 450 aaPredicted RBP26.17■■□□□ 1.78
CDK9-201ENST00000373264 ZBTB21Q9ULJ3 1066 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 COL4A5P29400 1685 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 CNTNAP1P78357 1384 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 PTK2Q05397 1052 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 LRCH2Q5VUJ6 765 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 NOX5Q96PH1 765 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 PKD2L1Q9P0L9 805 aa26.17■■□□□ 1.78
CDK9-201ENST00000373264 CYP3A4P08684 503 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 ARP10275 920 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 PON1P27169 355 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 RNASE9P60153 205 aaKnown RBP26.16■■□□□ 1.78
CDK9-201ENST00000373264 FAM184BQ9ULE4 1060 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 TMX2Q9Y320 296 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 HYOU1Q9Y4L1 999 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 PIK3CDO00329 1044 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 TGFB1I1O43294 461 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 TBCAO75347 108 aaKnown RBP26.16■■□□□ 1.78
CDK9-201ENST00000373264 EYA4O95677 639 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 SLC18A3Q16572 532 aa26.16■■□□□ 1.78
CDK9-201ENST00000373264 CCNI2Q6ZMN8 369 aaPredicted RBP26.16■■□□□ 1.78
CDK9-201ENST00000373264 ZNF571Q7Z3V5 609 aaPredicted RBP26.16■■□□□ 1.78
CDK9-201ENST00000373264 PSMD10O75832 226 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 UCHL3P15374 230 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 HOXA7P31268 230 aaPredicted RBP26.15■■□□□ 1.78
CDK9-201ENST00000373264 LMAN1P49257 510 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 ASIC2Q16515 512 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 KIAA0753Q2KHM9 967 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 PPP4R3CPQ6ZMV5 832 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 SYN2Q92777 582 aaPredicted RBP26.15■■□□□ 1.78
CDK9-201ENST00000373264 RPGRIP1Q96KN7 1286 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 POLR3CQ9BUI4 534 aaPredicted RBP26.15■■□□□ 1.78
CDK9-201ENST00000373264 ARHGEF10LQ9HCE6 1279 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 RBM12Q9NTZ6 932 aaKnown RBP26.15■■□□□ 1.78
CDK9-201ENST00000373264 AFPP02771 609 aaKnown RBP26.15■■□□□ 1.78
CDK9-201ENST00000373264 DGKZQ13574 1117 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 IRF2BP2Q7Z5L9 587 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 AIPL1Q9NZN9 384 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 HPCAL4Q9UM19 191 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 ZC3H4Q9UPT8 1303 aaKnown RBP26.15■■□□□ 1.78
CDK9-201ENST00000373264 ZMYM2Q9UBW7 1377 aa26.15■■□□□ 1.78
CDK9-201ENST00000373264 TARSL2A2RTX5 802 aaKnown RBP26.14■■□□□ 1.78
CDK9-201ENST00000373264 DDX39AO00148 427 aaKnown RBP26.14■■□□□ 1.78
CDK9-201ENST00000373264 XRCC5P13010 732 aaKnown RBP26.14■■□□□ 1.78
CDK9-201ENST00000373264 MYCT1Q8N699 235 aa26.14■■□□□ 1.78
CDK9-201ENST00000373264 SELENOOQ9BVL4 669 aa26.14■■□□□ 1.78
CDK9-201ENST00000373264 PDXKO00764 312 aa26.14■■□□□ 1.77
CDK9-201ENST00000373264 EIF3JO75822 258 aaKnown RBP26.14■■□□□ 1.77
CDK9-201ENST00000373264 RSBN1LQ6PCB5 846 aaPredicted RBP26.14■■□□□ 1.77
CDK9-201ENST00000373264 FRMD5Q7Z6J6 570 aa26.14■■□□□ 1.77
CDK9-201ENST00000373264 SLC35C1Q96A29 364 aa26.14■■□□□ 1.77
CDK9-201ENST00000373264 HERC5Q9UII4 1024 aaKnown RBP26.14■■□□□ 1.77
CDK9-201ENST00000373264 SYF2O95926 243 aaKnown RBP26.13■■□□□ 1.77
CDK9-201ENST00000373264 DLGAP5Q15398 846 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 EXOC3L4Q17RC7 722 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 TMOD2Q9NZR1 351 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 ATAD5Q96QE3 1844 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 GCOM1H8Y6P7 765 aaPredicted RBP26.13■■□□□ 1.77
CDK9-201ENST00000373264 SLC26A4O43511 780 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 POLR2MP0CAP2 368 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 FAM193AP78312 1265 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 EPHA7Q15375 998 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 NAB2Q15742 525 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 CCDC181Q5TID7 509 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 C1orf186Q6ZWK4 172 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 SIX2Q9NPC8 291 aa26.13■■□□□ 1.77
CDK9-201ENST00000373264 TYW1Q9NV66 732 aaKnown RBP26.13■■□□□ 1.77
CDK9-201ENST00000373264 SHTN1A0MZ66 631 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 CALUO43852 315 aaPredicted RBP26.12■■□□□ 1.77
CDK9-201ENST00000373264 TUBBP07437 444 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 HNRNPH2P55795 449 aaKnown RBP26.12■■□□□ 1.77
CDK9-201ENST00000373264 MMGT1Q8N4V1 131 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 BANK1Q8NDB2 785 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 SPAG5Q96R06 1193 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 UNC45AQ9H3U1 944 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 BCS1LQ9Y276 419 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 PRLRP16471 622 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 TCP1P17987 556 aaKnown RBP26.12■■□□□ 1.77
CDK9-201ENST00000373264 AGBL1Q96MI9 1066 aa26.12■■□□□ 1.77
CDK9-201ENST00000373264 NUCKS1Q9H1E3 243 aaKnown RBP26.12■■□□□ 1.77
CDK9-201ENST00000373264 ZSCAN5CA6NGD5 496 aaPredicted RBP26.11■■□□□ 1.77
CDK9-201ENST00000373264 GAS7O60861 476 aa26.11■■□□□ 1.77
CDK9-201ENST00000373264 FAM13AO94988 1023 aa26.11■■□□□ 1.77
CDK9-201ENST00000373264 PLS1Q14651 629 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms