RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 HIBCHQ6NVY1 386 aaPredicted RBP13.16□□□□□ -0.3
NCDN-202ENST00000373243 PIGOQ8TEQ8 1089 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 TARSL2A2RTX5 802 aaKnown RBP13.16□□□□□ -0.3
NCDN-202ENST00000373243 RTN2O75298 545 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 PDXDC1Q6P996 788 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 KIAA0895Q8NCT3 520 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 RAD54LQ92698 747 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 STAMBPL1Q96FJ0 436 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 TSC22D3Q99576 134 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 VCPKMTQ9H867 229 aa13.16□□□□□ -0.3
NCDN-202ENST00000373243 A0A087X0T9 212 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 FAM228BP0C875 321 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 RASA1P20936 1047 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 ALS2CLQ60I27 953 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
NCDN-202ENST00000373243 ANKRD42Q8N9B4 389 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 DNAJC17Q9NVM6 304 aaKnown RBP13.15□□□□□ -0.3
NCDN-202ENST00000373243 GLI1P08151 1106 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 SLC9A1P19634 815 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 AMPD2Q01433 879 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.3
NCDN-202ENST00000373243 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 VIPAS39Q9H9C1 493 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
NCDN-202ENST00000373243 DAPK3O43293 454 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 CALUO43852 315 aaPredicted RBP13.15□□□□□ -0.31
NCDN-202ENST00000373243 FAM153BP0C7A2 387 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 TMOD1P28289 359 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 COPB2P35606 906 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 FAM153CQ494X1 144 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 MYLK4Q86YV6 388 aaPredicted RBP13.15□□□□□ -0.31
NCDN-202ENST00000373243 CCDC105Q8IYK2 499 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 TRIM4Q9C037 500 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 ATP6V0A4Q9HBG4 840 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 GCNT4Q9P109 453 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 FAM153AQ9UHL3 310 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 USP21Q9UK80 565 aa13.15□□□□□ -0.31
NCDN-202ENST00000373243 PGRMC1O00264 195 aaKnown RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 AKR1B1P15121 316 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 FBXO33Q7Z6M2 555 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 PHLDB2Q86SQ0 1253 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 FGGP02679 453 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 SEPT7Q16181 437 aaKnown RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 WLSQ5T9L3 541 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 RNPC3Q96LT9 517 aaKnown RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 COL5A2P05997 1499 aaPredicted RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 GDF11O95390 407 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 RAB27AP51159 221 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 MESDQ14696 234 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 GRIK5Q16478 980 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 LRRC23Q53EV4 343 aaPredicted RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 ANKS4BQ8N8V4 417 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 IQCDQ96DY2 449 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 RMI1Q9H9A7 625 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 SAMD15Q9P1V8 674 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 CHORDC1Q9UHD1 332 aaPredicted RBP13.14□□□□□ -0.31
NCDN-202ENST00000373243 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 RASAL2Q9UJF2 1139 aa13.14□□□□□ -0.31
NCDN-202ENST00000373243 RAD51CO43502 376 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
NCDN-202ENST00000373243 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
NCDN-202ENST00000373243 SLURP2P0DP57 97 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 GRB10Q13322 594 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 SLC30A10Q6XR72 485 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 CEP72Q9P209 647 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 SNX24Q9Y343 169 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 KLRC4O43908 158 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 GNA14O95837 355 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 PRPHP41219 470 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 ICA1Q05084 483 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 DBN1Q16643 649 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 GJB7Q6PEY0 223 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 FAM196AQ6ZSG2 479 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 CREG2Q8IUH2 290 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 ARL10Q8N8L6 244 aa13.13□□□□□ -0.31
NCDN-202ENST00000373243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
NCDN-202ENST00000373243 PVALEFA0A1B0GWK0 134 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.31
NCDN-202ENST00000373243 RGS16O15492 202 aaPredicted RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 EEF2P13639 858 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 MAGOHP61326 146 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
NCDN-202ENST00000373243 TRADDQ15628 312 aa13.12□□□□□ -0.31
NCDN-202ENST00000373243 NPY5RQ15761 445 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms