RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 TMC7Q7Z402 723 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 RSPH3Q86UC2 560 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 RTN4RL1Q86UN2 441 aaPredicted RBP9.25□□□□□ -0.93
YIPF3-201ENST00000372417 C12orf76Q8N812 135 aaPredicted RBP9.25□□□□□ -0.93
YIPF3-201ENST00000372417 PJA1Q8NG27 643 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 LMBR1Q8WVP7 490 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 STRBPQ96SI9 672 aaKnown RBP9.25□□□□□ -0.93
YIPF3-201ENST00000372417 RMDN3Q96TC7 470 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 SPATA6Q9NWH7 488 aaPredicted RBP9.25□□□□□ -0.93
YIPF3-201ENST00000372417 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 IGSF10Q6WRI0 2623 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 BPTFQ12830 3046 aa9.25□□□□□ -0.93
YIPF3-201ENST00000372417 COL4A3Q01955 1670 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 TBKBP1A7MCY6 615 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 C1QTNF9BB2RNN3 333 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 CLASP2O75122 1294 aaKnown RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 C1QTNF9P0C862 333 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 GLULP15104 373 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 LAG3P18627 525 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 EIF2AK2P19525 551 aaKnown RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 IBSPP21815 317 aaPredicted RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 ADAM17P78536 824 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 CSTF1Q05048 431 aaKnown RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 SLFN5Q08AF3 891 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 SMC1AQ14683 1233 aaKnown RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 USH1GQ495M9 461 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 TAF2Q6P1X5 1199 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 ZBTB44Q8NCP5 570 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 SYTL5Q8TDW5 730 aaPredicted RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 MAF1Q9H063 256 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 AGO3Q9H9G7 860 aaKnown RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 EPB41L4AQ9HCS5 686 aaPredicted RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 IL1RAPL2Q9NP60 686 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 ARHGEF3Q9NR81 526 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 ZSCAN32Q9NX65 697 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 COL20A1Q9P218 1284 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 CDY2AQ9Y6F7 541 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 LAMA5O15230 3695 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 FRMPD2Q68DX3 1309 aaPredicted RBP9.24□□□□□ -0.93
YIPF3-201ENST00000372417 NRCAMQ92823 1304 aa9.24□□□□□ -0.93
YIPF3-201ENST00000372417 DOCK6Q96HP0 2047 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 LILRB5O75023 590 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 LRP3O75074 770 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 SLC3A2P08195 630 aaKnown RBP9.23□□□□□ -0.93
YIPF3-201ENST00000372417 CT47B1P0C2W7 299 aaPredicted RBP9.23□□□□□ -0.93
YIPF3-201ENST00000372417 SRFP11831 508 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 UBA1P22314 1058 aaKnown RBP9.23□□□□□ -0.93
YIPF3-201ENST00000372417 CA8P35219 290 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 SARSP49591 514 aaKnown RBP9.23□□□□□ -0.93
YIPF3-201ENST00000372417 RING1Q06587 406 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 KANK3Q6NY19 840 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 KDF1Q8NAX2 398 aaPredicted RBP9.23□□□□□ -0.93
YIPF3-201ENST00000372417 USP26Q9BXU7 913 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 FOXQ1Q9C009 403 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 BOLA2Q9H3K6 86 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 C1orf115Q9H7X2 142 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 MLXIPQ9HAP2 919 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 TYW1Q9NV66 732 aaKnown RBP9.23□□□□□ -0.93
YIPF3-201ENST00000372417 HCSTQ9UBK5 93 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 ZNF215Q9UL58 517 aaPredicted RBP9.23□□□□□ -0.93
YIPF3-201ENST00000372417 RAB23Q9ULC3 237 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 EXOC6BQ9Y2D4 811 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 PCDHB7Q9Y5E2 793 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 LAMA1P25391 3075 aa9.23□□□□□ -0.93
YIPF3-201ENST00000372417 C2orf71A6NGG8 1288 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 TSPY2A6NKD2 308 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 TAF4O00268 1085 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 NOP56O00567 594 aaKnown RBP9.22□□□□□ -0.93
YIPF3-201ENST00000372417 NR3C2P08235 984 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 PPM1AP35813 382 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 MRPS6P82932 125 aaKnown RBP9.22□□□□□ -0.93
YIPF3-201ENST00000372417 KRT17Q04695 432 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 PAK2Q13177 524 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 IL31Q6EBC2 164 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 DCLRE1AQ6PJP8 1040 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 TMC5Q6UXY8 1006 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 TBC1D5Q92609 795 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 BCO2Q9BYV7 579 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 CWH43Q9H720 699 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 PXMP2Q9NR77 195 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 SQORQ9Y6N5 450 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 ABCB11O95342 1321 aa9.22□□□□□ -0.93
YIPF3-201ENST00000372417 TMEM8BA6NDV4 472 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 SPDYE4A6NLX3 237 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 SRRM3A6NNA2 597 aaPredicted RBP9.21□□□□□ -0.94
YIPF3-201ENST00000372417 NMT2O60551 498 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 LRRN2O75325 713 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 APPP05067 770 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 IFIT2P09913 472 aaKnown RBP9.21□□□□□ -0.94
YIPF3-201ENST00000372417 MYCLP12524 364 aaPredicted RBP9.21□□□□□ -0.94
YIPF3-201ENST00000372417 TRIM27P14373 513 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 SP2Q02086 613 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 LAIR1Q6GTX8 287 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 PRR23CQ6ZRP0 262 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 GPR149Q86SP6 731 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 CABP7Q86V35 215 aa9.21□□□□□ -0.94
YIPF3-201ENST00000372417 MCF2L2Q86YR7 1114 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms