RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SGMS1Q86VZ5 419 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 GDAP1L1Q96MZ0 367 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 KIF9Q9HAQ2 790 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 KIAA1586Q9HCI6 787 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 ATF2P15336 505 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 RPS12P25398 132 aaKnown RBP15.95■□□□□ 0.14
NDC1-201ENST00000371429 PSMC5P62195 406 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 MUM1L1Q5H9M0 696 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 POTEB3A0JP26 581 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 POTECB2RU33 542 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 PPARDQ03181 441 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 RBL2Q08999 1139 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 POTEBQ6S5H4 581 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 STAG2Q8N3U4 1231 aa15.95■□□□□ 0.14
NDC1-201ENST00000371429 SLC16A4O15374 487 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 HUNKP57058 714 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 ORC2Q13416 577 aaPredicted RBP15.94■□□□□ 0.14
NDC1-201ENST00000371429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.94■□□□□ 0.14
NDC1-201ENST00000371429 XXYLT1Q8NBI6 393 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 MYOZ2Q9NPC6 264 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 TYW1Q9NV66 732 aaKnown RBP15.94■□□□□ 0.14
NDC1-201ENST00000371429 NDUFB10O96000 172 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 TXNP10599 105 aaKnown RBP15.94■□□□□ 0.14
NDC1-201ENST00000371429 POTEDQ86YR6 584 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 DIP2AQ14689 1571 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 TPD52P55327 224 aaPredicted RBP15.94■□□□□ 0.14
NDC1-201ENST00000371429 THEM5Q8N1Q8 247 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 BBOF1Q8ND07 529 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 C2orf40Q9H1Z8 148 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 IPO11Q9UI26 975 aaKnown RBP15.94■□□□□ 0.14
NDC1-201ENST00000371429 RGS16O15492 202 aaPredicted RBP15.94■□□□□ 0.14
NDC1-201ENST00000371429 LMNB2Q03252 620 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 SAMD7Q7Z3H4 446 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 PARK7Q99497 189 aaKnown RBP15.94■□□□□ 0.14
NDC1-201ENST00000371429 DEFB129Q9H1M3 183 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 POLD4Q9HCU8 107 aa15.94■□□□□ 0.14
NDC1-201ENST00000371429 CTNNA1P35221 906 aaKnown RBP15.93■□□□□ 0.14
NDC1-201ENST00000371429 USP11P51784 963 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 CUL4BQ13620 913 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 KCNV1Q6PIU1 500 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 SDCCAG8Q86SQ7 713 aaPredicted RBP15.93■□□□□ 0.14
NDC1-201ENST00000371429 PNMA8AQ86V59 439 aaPredicted RBP15.93■□□□□ 0.14
NDC1-201ENST00000371429 TSC1Q92574 1164 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 CALN1Q9BXU9 219 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 GDAQ9Y2T3 454 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 PCDHA10Q9Y5I2 948 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 PASKQ96RG2 1323 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 NDUFAB1O14561 156 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 ZBED6P86452 979 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 SKA2Q8WVK7 121 aaPredicted RBP15.93■□□□□ 0.14
NDC1-201ENST00000371429 ZNF668Q96K58 619 aaPredicted RBP15.93■□□□□ 0.14
NDC1-201ENST00000371429 RESP18Q5W5W9 173 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 MAGOHBQ96A72 148 aaKnown RBP15.93■□□□□ 0.14
NDC1-201ENST00000371429 LXNQ9BS40 222 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 ESYT2A0FGR8 921 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 PTPN21Q16825 1174 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 SBK1Q52WX2 424 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 CEP55Q53EZ4 464 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 FBXO33Q7Z6M2 555 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 GCOM2Q9BZD3 368 aaPredicted RBP15.93■□□□□ 0.14
NDC1-201ENST00000371429 NYAP2Q9P242 653 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 ANAPC5Q9UJX4 755 aa15.93■□□□□ 0.14
NDC1-201ENST00000371429 SGK1O00141 431 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 HUS1O60921 280 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 TDP2O95551 362 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 PPFIA1Q13136 1202 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 RAD54LQ92698 747 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 GOLGA8CPA6NN73 597 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 PRPSAP2O60256 369 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 ZNF543Q08ER8 600 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 POTEGQ6S5H5 508 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 ZNF579Q8NAF0 562 aaKnown RBP15.92■□□□□ 0.14
NDC1-201ENST00000371429 SLC9A2Q9UBY0 812 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 HGSO14964 777 aaPredicted RBP15.92■□□□□ 0.14
NDC1-201ENST00000371429 SRGAP2BP0DMP2 458 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 SAT1P21673 171 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 COL23A1Q86Y22 540 aaPredicted RBP15.92■□□□□ 0.14
NDC1-201ENST00000371429 TMEM106CQ9BVX2 250 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 ZFYVE28Q9HCC9 887 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 BAATQ14032 418 aaPredicted RBP15.92■□□□□ 0.14
NDC1-201ENST00000371429 ZNF394Q53GI3 561 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 PHLDB2Q86SQ0 1253 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 AGBL3Q8NEM8 1001 aa15.92■□□□□ 0.14
NDC1-201ENST00000371429 SCAF8Q9UPN6 1271 aaKnown RBP15.92■□□□□ 0.14
NDC1-201ENST00000371429 KRT1P04264 644 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 MNAT1P51948 309 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 BEST2Q8NFU1 509 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 URGCPQ8TCY9 931 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 CDKL2Q92772 493 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 FAM213AQ9BRX8 229 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 SPZ1Q9BXG8 430 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 CPS1P31327 1500 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 A6NNZ2 444 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 YWHAGP61981 247 aaKnown RBP eCLIP15.91■□□□□ 0.14
NDC1-201ENST00000371429 TUBB8Q3ZCM7 444 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 ERICH1Q86X53 443 aa15.91■□□□□ 0.14
NDC1-201ENST00000371429 CLEC10AQ8IUN9 316 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms