RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 NUCB2P80303 420 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 SPIRE1Q08AE8 756 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 SF3A1Q15459 793 aaKnown RBP15.43■□□□□ 0.06
SSR4-202ENST00000370085 TPH2Q8IWU9 490 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 C4orf32Q8N8J7 132 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 BANK1Q8NDB2 785 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 LMBR1Q8WVP7 490 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 EIF2AK1Q9BQI3 630 aaKnown RBP15.43■□□□□ 0.06
SSR4-202ENST00000370085 LXNQ9BS40 222 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 TBX21Q9UL17 535 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 ZMYND8Q9ULU4 1186 aaPredicted RBP15.43■□□□□ 0.06
SSR4-202ENST00000370085 PPME1Q9Y570 386 aa15.43■□□□□ 0.06
SSR4-202ENST00000370085 TRIP12Q14669 1992 aaPredicted RBP15.42■□□□□ 0.06
SSR4-202ENST00000370085 POTEMA6NI47 508 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 EML1O00423 815 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 MAGEB2O15479 319 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 CAND2O75155 1236 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 PARNO95453 639 aaKnown RBP15.42■□□□□ 0.06
SSR4-202ENST00000370085 TIMP1P01033 207 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 MUTP22033 750 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 HOXC8P31273 242 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
SSR4-202ENST00000370085 KRT79Q5XKE5 535 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
SSR4-202ENST00000370085 SERINC5Q86VE9 423 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 C4orf19Q8IY42 314 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 TMEM199Q8N511 208 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 PPP1R13LQ8WUF5 828 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
SSR4-202ENST00000370085 AK8Q96MA6 479 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 JPH2Q9BR39 696 aaPredicted RBP15.42■□□□□ 0.06
SSR4-202ENST00000370085 TUFT1Q9NNX1 390 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 SEPT9Q9UHD8 586 aaPredicted RBP15.42■□□□□ 0.06
SSR4-202ENST00000370085 CFAP45Q9UL16 551 aa15.42■□□□□ 0.06
SSR4-202ENST00000370085 VWA3AA6NCI4 1184 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 DDX11L8A8MPP1 907 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 H0YGN5 161 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 TREHO43280 583 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 CYP2C9P11712 490 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 SYN1P17600 705 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 TMOD1P28289 359 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 CYP4A11Q02928 519 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 STK38Q15208 465 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 IGSF22Q8N9C0 903 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 DYDC2Q96IM9 177 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 POLR3CQ9BUI4 534 aaPredicted RBP15.41■□□□□ 0.06
SSR4-202ENST00000370085 MYH15Q9Y2K3 1946 aa15.41■□□□□ 0.06
SSR4-202ENST00000370085 MBLAC1A4D2B0 266 aaPredicted RBP15.4■□□□□ 0.06
SSR4-202ENST00000370085 TRIM43BA6NCK2 446 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 M0QZ92 97 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 ZNF862O60290 1169 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 BRD1O95696 1058 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 RPA1P27694 616 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 YWHABP31946 246 aaKnown RBP15.4■□□□□ 0.06
SSR4-202ENST00000370085 CCT6AP40227 531 aaKnown RBP15.4■□□□□ 0.06
SSR4-202ENST00000370085 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
SSR4-202ENST00000370085 TBC1D8BQ0IIM8 1120 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 UGCGQ16739 394 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 MFSD5Q6N075 450 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 SH3RF1Q7Z6J0 888 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 ZNF710Q8N1W2 664 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 SNX29Q8TEQ0 813 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 TRIM43Q96BQ3 446 aaPredicted RBP15.4■□□□□ 0.06
SSR4-202ENST00000370085 CDK5RAP3Q96JB5 506 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 NACC1Q96RE7 527 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 HSD17B14Q9BPX1 270 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 NOC4LQ9BVI4 516 aaKnown RBP15.4■□□□□ 0.06
SSR4-202ENST00000370085 NIFKQ9BYG3 293 aaKnown RBP15.4■□□□□ 0.06
SSR4-202ENST00000370085 PPP1R12CQ9BZL4 782 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 PCDHA2Q9Y5H9 948 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 KDM3AQ9Y4C1 1321 aa15.4■□□□□ 0.06
SSR4-202ENST00000370085 SMIM35A0A1B0GVV1 85 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 SLC26A4O43511 780 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 SLITRK3O94933 977 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 LYPLA2O95372 231 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 XRCC6P12956 609 aaKnown RBP eCLIP15.39■□□□□ 0.05
SSR4-202ENST00000370085 ATP4AP20648 1035 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 KLRC1P26715 233 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 RFC2P35250 354 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 LONP1P36776 959 aaKnown RBP15.39■□□□□ 0.05
SSR4-202ENST00000370085 TXLNAP40222 546 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 THPOP40225 353 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 DNM2P50570 870 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 ADAM17P78536 824 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 ZNF200P98182 395 aaPredicted RBP15.39■□□□□ 0.05
SSR4-202ENST00000370085 FPGSQ05932 587 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 RBL2Q08999 1139 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 PPIGQ13427 754 aaKnown RBP eCLIP15.39■□□□□ 0.057e-9■□□□□ 8.7
SSR4-202ENST00000370085 CTTNQ14247 550 aaKnown RBP15.39■□□□□ 0.05
SSR4-202ENST00000370085 PRPF38BQ5VTL8 546 aaKnown RBP15.39■□□□□ 0.05
SSR4-202ENST00000370085 FAM173BQ6P4H8 233 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 MTHFD1LQ6UB35 978 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 RPUSD2Q8IZ73 545 aaKnown RBP15.39■□□□□ 0.05
SSR4-202ENST00000370085 NME8Q8N427 588 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 KCTD17Q8N5Z5 321 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 SLC7A3Q8WY07 619 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 CEP170P1Q96L14 293 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 MAP7D2Q96T17 732 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms