RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 SUN1O94901 812 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 EPB41P11171 864 aaKnown RBP11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 PMS2P54278 862 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.31□□□□□ -0.67e-8■■■□□ 19.2
PRPF38B-201ENST00000370021 GDF3Q9NR23 364 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 EMILIN3Q9NT22 766 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 KBTBD4Q9NVX7 518 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 NKIRAS1Q9NYS0 192 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 KLHL14Q9P2G3 628 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 STAT1P42224 750 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 ZBTB16Q05516 673 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 MTM1Q13496 603 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 SETDB1Q15047 1291 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 FAM118BQ9BPY3 351 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 DCP1AQ9NPI6 582 aaPredicted RBP11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 IRAK4Q9NWZ3 460 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 HDAC9Q9UKV0 1011 aa11.31□□□□□ -0.6
PRPF38B-201ENST00000370021 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 MRC1P22897 1456 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 TBCAO75347 108 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 CRYMQ14894 314 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 MUM1Q2TAK8 710 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 FBXO25Q8TCJ0 367 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 OSBPL1AQ9BXW6 950 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 CEP72Q9P209 647 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 RASSF9O75901 435 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 RNASELQ05823 741 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 SEMA4AQ9H3S1 761 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 G3BP2Q9UN86 482 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 SLIT3O75094 1523 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 ABCC6O95255 1503 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 PPP1R12AO14974 1030 aaPredicted RBP11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 HIBADHP31937 336 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 STAT3P40763 770 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 NSMFQ6X4W1 530 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 UNC13DQ70J99 1090 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 GSTA5Q7RTV2 222 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 TRIM7Q9C029 511 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 PLCB1Q9NQ66 1216 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 HOMER3Q9NSC5 361 aa11.3□□□□□ -0.6
PRPF38B-201ENST00000370021 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 G3V3G9 751 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 COASYQ13057 564 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 UAP1Q16222 522 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 TAOK1Q7L7X3 1001 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 CCSER1Q9C0I3 900 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 FAM114A2Q9NRY5 505 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 GCNT4Q9P109 453 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 POTECB2RU33 542 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 PRLRP16471 622 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 KLRK1P26718 216 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 RAD23BP54727 409 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 RBBP5Q15291 538 aaKnown RBP11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 LMNTD2Q8IXW0 634 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 PIK3R5Q8WYR1 880 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 PBKQ96KB5 322 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 EYA3Q99504 573 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 SIK3Q9Y2K2 1263 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 MYH13Q9UKX3 1938 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 ERVV-2B6SEH9 535 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 KRT15P19012 456 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 PPP1R2P41236 205 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 MSH2P43246 934 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 SNAP25P60880 206 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 DDR1Q08345 913 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 MEI1Q5TIA1 1274 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 ERICH1Q86X53 443 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 ZSCAN29Q8IWY8 852 aaPredicted RBP11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 TMEM47Q9BQJ4 181 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
PRPF38B-201ENST00000370021 SPAG7O75391 227 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 NUCKS1Q9H1E3 243 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 USH1CQ9Y6N9 552 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 LRRD1A4D1F6 860 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 TLR2O60603 784 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 ADCY7P51828 1080 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 GALCP54803 685 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms