RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PPARGP37231 505 aaPredicted RBP13.37□□□□□ -0.27
HCFC1-202ENST00000369984 SLC39A14Q15043 492 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 PANX2Q96RD6 677 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 LRRC4Q9HBW1 653 aa13.37□□□□□ -0.27
HCFC1-202ENST00000369984 GOLGA4Q13439 2230 aaKnown RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 F8W8V4 182 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 ATP5HO75947 161 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 ZBED1O96006 694 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 IFNA8P32881 189 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 CARSP49589 748 aaKnown RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 RPS8P62241 208 aaKnown RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 DRP2Q13474 957 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 Q3C1V9 767 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 ELAC2Q9BQ52 826 aaKnown RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 MYOM2P54296 1465 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 M0R2C6 588 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 CCND2P30279 289 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 AP2B1P63010 937 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 MDM2Q00987 491 aaPredicted RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 TAF1BQ53T94 588 aaPredicted RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 SH3GL3Q99963 347 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 TRAPPC8Q9Y2L5 1435 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 MYL1P05976 194 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 CDO1Q16878 200 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 ARL13BQ3SXY8 428 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 TBC1D1Q86TI0 1168 aaPredicted RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 TRIM8Q9BZR9 551 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 MRPL28Q13084 256 aaKnown RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 FSCBQ5H9T9 825 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 FAM180AQ6UWF9 173 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 RGS9BPQ6ZS82 235 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 FAF2Q96CS3 445 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 NFKBIL1Q9UBC1 381 aaPredicted RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 NXF1Q9UBU9 619 aaKnown RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 SUN2Q9UH99 717 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 CCDC15Q0P6D6 951 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 C1orf146Q5VVC0 180 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 PDIK1LQ8N165 341 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 TTC17Q96AE7 1141 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 OPTNQ96CV9 577 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 GINM1Q9NU53 330 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 APOBEC2Q9Y235 224 aaKnown RBP13.36□□□□□ -0.27
HCFC1-202ENST00000369984 H0Y3Z8 333 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 EIF3DO15371 548 aaKnown RBP eCLIP13.36□□□□□ -0.273e-6■■■■□ 21.9
HCFC1-202ENST00000369984 DNAJC6O75061 913 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 PYGBP11216 843 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 RAPGEF5Q92565 580 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 ZBTB18Q99592 522 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 ZWILCHQ9H900 591 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 PARVGQ9HBI0 331 aa13.36□□□□□ -0.27
HCFC1-202ENST00000369984 KRT75O95678 551 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 STAT2P52630 851 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 UHRF1BP1Q6BDS2 1440 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 ICA1LQ8NDH6 482 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 LZICQ8WZA0 190 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 NCKAP5LQ9HCH0 1330 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 PODXLO00592 558 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 FOSP01100 380 aaPredicted RBP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 NSUN2Q08J23 767 aaKnown RBP eCLIP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 SLFN13Q68D06 897 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 HEXIM2Q96MH2 286 aaKnown RBP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 THAP9Q9H5L6 903 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 PPARGC1AQ9UBK2 798 aaKnown RBP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 ZFP69BQ9UJL9 534 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 MAGEA9P43362 315 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 EPHB1P54762 984 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 MECOMQ03112 1051 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 BZW1Q7L1Q6 419 aaKnown RBP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 MEIS1O00470 390 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 KCNA1Q09470 495 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 RWDD4Q6NW29 188 aaKnown RBP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 ACAD11Q709F0 780 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 EXOC8Q8IYI6 725 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 SAAL1Q96ER3 474 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 DACH2Q96NX9 599 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 NACC1Q96RE7 527 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 LZTS1Q9Y250 596 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 SUGT1Q9Y2Z0 365 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 WDR64B1ANS9 1081 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 SLFN14P0C7P3 912 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 CD58P19256 250 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 PSMA2P25787 234 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 KIAA0825Q8IV33 1275 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 RNF139Q8WU17 664 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 PRKAG2Q9UGJ0 569 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 RASA4BC9J798 803 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 RASA4O43374 803 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 LRRC37BQ96QE4 947 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 UBXN2AP68543 259 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 RASGRP4Q8TDF6 673 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 RNF26Q9BY78 433 aaPredicted RBP13.35□□□□□ -0.27
HCFC1-202ENST00000369984 YIPF3Q9GZM5 350 aa13.35□□□□□ -0.27
HCFC1-202ENST00000369984 ABCB6Q9NP58 842 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms