RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 POTEBQ6S5H4 581 aa23.26■■□□□ 1.31
SMNDC1-201ENST00000369592 ZNF576Q9H609 170 aa23.26■■□□□ 1.31
SMNDC1-201ENST00000369592 PCDHA10Q9Y5I2 948 aa23.26■■□□□ 1.31
SMNDC1-201ENST00000369592 PRUNE2Q8WUY3 3088 aa23.26■■□□□ 1.31
SMNDC1-201ENST00000369592 RABGGTBP53611 331 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 FAM160B1Q5W0V3 765 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 SWSAP1Q6NVH7 229 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 DBF4BQ8NFT6 615 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 MYLIPQ8WY64 445 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 ZBTB10Q96DT7 871 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 ZNF302Q9NR11 478 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 PCDHA2Q9Y5H9 948 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 IGSF9BQ9UPX0 1349 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 LOXHD1Q8IVV2 1947 aa23.25■■□□□ 1.31
SMNDC1-201ENST00000369592 HBP1O60381 514 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 GRIN2CQ14957 1233 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 PPP4R3AQ6IN85 833 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 HERC6Q8IVU3 1022 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 TRAPPC12Q8WVT3 735 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 TNPO1Q92973 898 aaKnown RBP23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 GJA10Q969M2 543 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 MSRAQ9UJ68 235 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 COL1A2P08123 1366 aa23.24■■□□□ 1.31
SMNDC1-201ENST00000369592 BACH1O14867 736 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 SLC37A4O43826 429 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 EFCAB14O75071 495 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 CTSHP09668 335 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 MYOGP15173 224 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 COL9A1P20849 921 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 DEFB103AP81534 67 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 PDXDC2PQ6P474 469 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 DNAJB3Q8WWF6 145 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 LLPHQ9BRT6 129 aaKnown RBP23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 NKX2-4Q9H2Z4 354 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 UNC45AQ9H3U1 944 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 KCNMB3Q9NPA1 279 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 TRPC6Q9Y210 931 aa23.23■■□□□ 1.31
SMNDC1-201ENST00000369592 CCDC194A0A1B0GVG4 234 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 FAM205CA6NFA0 338 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 WDR64B1ANS9 1081 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 ZNF862O60290 1169 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 MMP1P03956 469 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 RPLP2P05387 115 aaKnown RBP23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 PSAPP07602 524 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 IGBP1P78318 339 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 NR5A1Q13285 461 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 LRCH2Q5VUJ6 765 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 MTHFD1LQ6UB35 978 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 NEK8Q86SG6 692 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 SYMPKQ92797 1274 aaKnown RBP23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 ZSCAN31Q96LW9 406 aaPredicted RBP23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 DISC1Q9NRI5 854 aa23.22■■□□□ 1.31
SMNDC1-201ENST00000369592 SMIM35A0A1B0GVV1 85 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 GAS7O60861 476 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 FOSL2P15408 326 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 SFNP31947 248 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 IKBKEQ14164 716 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 ZNF484Q5JVG2 852 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 PIK3AP1Q6ZUJ8 805 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 RDM1Q8NG50 284 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 BBXQ8WY36 941 aaPredicted RBP23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 GABBR1Q9UBS5 961 aa23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 DDX25Q9UHL0 483 aaKnown RBP23.21■■□□□ 1.31
SMNDC1-201ENST00000369592 GCFC2P16383 781 aaKnown RBP23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 KRT2P35908 639 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 RABEP1Q15276 862 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 LETM2Q2VYF4 491 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 KRT40Q6A162 431 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 RSPH3Q86UC2 560 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 CCDC83Q8IWF9 413 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 HAS1Q92839 578 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 TEKT3Q9BXF9 490 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 SH2B1Q9NRF2 756 aaPredicted RBP23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 TRANK1O15050 2925 aa23.2■■□□□ 1.3
SMNDC1-201ENST00000369592 KDM3AQ9Y4C1 1321 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 BTBD18B2RXH4 712 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 ARHGEF15O94989 841 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 STBD1O95210 358 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 KLRC1P26715 233 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 JAK3P52333 1124 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 MRPS6P82932 125 aaKnown RBP23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 LPIN1Q14693 890 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 UGCGQ16739 394 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 FBXO47Q5MNV8 452 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 IL27Q8NEV9 243 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 SEPT8Q92599 483 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 FAM20AQ96MK3 541 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 VAV3Q9UKW4 847 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 CDY2AQ9Y6F7 541 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 SQORQ9Y6N5 450 aa23.19■■□□□ 1.3
SMNDC1-201ENST00000369592 TTC3P53804 2025 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 TBX3O15119 743 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 GJB5O95377 273 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 C22orf31O95567 290 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 KCNJ6P48051 423 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 TMCO2Q7Z6W1 182 aaPredicted RBP23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 KIAA0319LQ8IZA0 1049 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 NME8Q8N427 588 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms