RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 RILPL1Q5EBL4 403 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 RBM43Q6ZSC3 357 aaKnown RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ANKRD13CQ8N6S4 541 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 TC2NQ8N9U0 490 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 NCOA7Q8NI08 942 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 PPP2R3CQ969Q6 453 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 EBF2Q9HAK2 575 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ARHGEF10LQ9HCE6 1279 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ANGPTL3Q9Y5C1 460 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 PSMD14O00487 310 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ASAP2O43150 1006 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 PENKP01210 267 aaPredicted RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 CYTH1Q15438 398 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 OTUD7BQ6GQQ9 843 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 RGS9BPQ6ZS82 235 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 MARK2Q7KZI7 788 aaKnown RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 MICU3Q86XE3 530 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 LRRC34Q8IZ02 419 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 RSPH1Q8WYR4 309 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 PRCCQ92733 491 aaPredicted RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ARPC5LQ9BPX5 153 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 SLC39A3Q9BRY0 314 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 BRD8Q9H0E9 1235 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 NAPBQ9H115 298 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 AZI2Q9H6S1 392 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 VPS37BQ9H9H4 285 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 FBXL5Q9UKA1 691 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 H0YC42 278 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ZNF213O14771 459 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 IFIT3O14879 490 aaKnown RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 SLC5A1P13866 664 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 GALK1P51570 392 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 PLTPP55058 493 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 GSTA3Q16772 222 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 CCSAPQ6IQ19 270 aaPredicted RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 TMEM53Q6P2H8 277 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 GSTA5Q7RTV2 222 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 NOP9Q86U38 636 aaKnown RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 CTAGE3PQ8IX95 158 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 ERP27Q96DN0 273 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 GPC6Q9Y625 555 aaPredicted RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 O00370 1275 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 HSPA8P11142 646 aaKnown RBP11.2□□□□□ -0.62
PRDM1-201ENST00000369089 SFMBT2Q5VUG0 894 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 VPS50Q96JG6 964 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 PBKQ96KB5 322 aa11.2□□□□□ -0.62
PRDM1-201ENST00000369089 THAP12O43422 761 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 TRAPPC3O43617 180 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 CEP78Q5JTW2 689 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 RRAGAQ7L523 313 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 TLK2Q86UE8 772 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 FMR1NBQ8N0W7 255 aaPredicted RBP11.19□□□□□ -0.62
PRDM1-201ENST00000369089 UBL4BQ8N7F7 174 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 LINC00301Q8NCQ3 95 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 GOLPH3LQ9H4A5 285 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 USP40Q9NVE5 1235 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 E9PMD0 336 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 H7C1D1 291 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 CCDC188H7C350 402 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 PGM1P36871 562 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 LACTB2Q53H82 288 aaPredicted RBP11.19□□□□□ -0.62
PRDM1-201ENST00000369089 MMTAG2Q9BU76 263 aaKnown RBP11.19□□□□□ -0.62
PRDM1-201ENST00000369089 PLGRKTQ9HBL7 147 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 AGTP01019 485 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 PYGMP11217 842 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 VAV1P15498 845 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 PPARGP37231 505 aaPredicted RBP11.19□□□□□ -0.62
PRDM1-201ENST00000369089 FNTAP49354 379 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 KIF23Q02241 960 aaPredicted RBP11.19□□□□□ -0.62
PRDM1-201ENST00000369089 MYBPC3Q14896 1274 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 C11orf74Q86VG3 221 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 KIFC2Q96AC6 838 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 TMBIM4Q9HC24 238 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 CYP39A1Q9NYL5 469 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 SSX2IPQ9Y2D8 614 aa11.19□□□□□ -0.62
PRDM1-201ENST00000369089 MINDY4BA8MYZ0 360 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 HMOX2P30519 316 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 STX3Q13277 289 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 PDCD4Q53EL6 469 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 C1orf228Q6PIY5 440 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 SCG3Q8WXD2 468 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 CAVIN3Q969G5 261 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 NHEJ1Q9H9Q4 299 aaPredicted RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 NCOA5Q9HCD5 579 aaKnown RBP11.18□□□□□ -0.62
PRDM1-201ENST00000369089 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 TCEAL9Q9UHQ7 104 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 AMFRQ9UKV5 643 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 CLIC4Q9Y696 253 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 SEMA3EO15041 775 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 BIRC5O15392 142 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 TMEM63BQ5T3F8 832 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
PRDM1-201ENST00000369089 RAD9BQ6WBX8 426 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms