RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 CNKSR1Q969H4 720 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 TANGO6Q9C0B7 1094 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 BLOC1S4Q9NUP1 217 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 SAMD15Q9P1V8 674 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 SUCLA2Q9P2R7 463 aaPredicted RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 MYH14Q7Z406 1995 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 A0A0A6YYK5 440 aaPredicted RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 MYMKA6NI61 221 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 ANP32DO95626 131 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 MMEP08473 750 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 CCNHP51946 323 aaPredicted RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 ZNF131P52739 623 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 POLR2FP61218 127 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 FKBP3Q00688 224 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 DHX9Q08211 1270 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 GRB10Q13322 594 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 TRPM8Q7Z2W7 1104 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 SLFN11Q7Z7L1 901 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 METTL13Q8N6R0 699 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 LMBR1Q8WVP7 490 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 HPS3Q969F9 1004 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 PACSIN1Q9BY11 444 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 RAB17Q9H0T7 212 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 GANQ9H2C0 597 aa11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 BZW2Q9Y6E2 419 aaKnown RBP11.47□□□□□ -0.57
LYSMD1-201ENST00000368908 GOLGA6L10A0A0M3HER8 536 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 KRIT1O00522 736 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 BACH1O14867 736 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 NMT2O60551 498 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 NQO1P15559 274 aaKnown RBP11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 CHN1P15882 459 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 CCND1P24385 295 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 LMNB2Q03252 620 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 SEPT2Q15019 361 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 NONOQ15233 471 aaKnown RBP eCLIP11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 DGKHQ86XP1 1220 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 ZNF34Q8IZ26 560 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 ZNF483Q8TF39 744 aaPredicted RBP11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 LARP4BQ92615 738 aaKnown RBP11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 TBC1D31Q96DN5 1066 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 DDX47Q9H0S4 455 aaKnown RBP11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 STXBP5LQ9Y2K9 1186 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.57
LYSMD1-201ENST00000368908 FRMD3A2A2Y4 597 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 USP17L12C9JPN9 530 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 USP17L21D6R901 530 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 SMNDC1O75940 238 aaKnown RBP eCLIP11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 NPEPPSP55786 919 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 DYNLL1P63167 89 aaKnown RBP11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 POU5F1Q01860 360 aaKnown RBP11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 RAPGEF1Q13905 1077 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 COL23A1Q86Y22 540 aaPredicted RBP11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 TRIM59Q8IWR1 403 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 SYCE1Q8N0S2 351 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 TCP11Q8WWU5 503 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 FMO2Q99518 471 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 SPATS2LQ9NUQ6 558 aaKnown RBP11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 PNMA2Q9UL42 364 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 INTUQ9ULD6 942 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 CORO1CQ9ULV4 474 aaPredicted RBP11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 NENFQ9UMX5 172 aa11.46□□□□□ -0.58
LYSMD1-201ENST00000368908 CCDC169A6NNP5 214 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 SNAP23O00161 211 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 AGTP01019 485 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 GCKP35557 465 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 CCNG1P51959 295 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 SARNPP82979 210 aaKnown RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 EGFL6Q8IUX8 553 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 MYOCDQ8IZQ8 938 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 GBP7Q8N8V2 638 aaPredicted RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 TPCN2Q8NHX9 752 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 AGAP11Q8TF27 550 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 SH3GL3Q99963 347 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 LZTS2Q9BRK4 669 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 TMEM109Q9BVC6 243 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ADAM7Q9H2U9 754 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 CCDC87Q9NVE4 849 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ADAMTS1Q9UHI8 967 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 DIS3Q9Y2L1 958 aaKnown RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 CAND2O75155 1236 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 LUC7L3O95232 432 aaKnown RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 OAS1P00973 400 aaKnown RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 CLTAP09496 248 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 CRKLP46109 303 aaKnown RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 NCALDP61601 193 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms