RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KRT79Q5XKE5 535 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 POTEBQ6S5H4 581 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 CATSPER3Q86XQ3 398 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 LEO1Q8WVC0 666 aaPredicted RBP15.58■□□□□ 0.08
TPM3-211ENST00000368531 PLIN2Q99541 437 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 SH2D3AQ9BRG2 576 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 SETD4Q9NVD3 440 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 SEPT9Q9UHD8 586 aaPredicted RBP15.58■□□□□ 0.08
TPM3-211ENST00000368531 RCOR1Q9UKL0 485 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 ATP11BQ9Y2G3 1177 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 IGSF9BQ9UPX0 1349 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 ALPK3Q96L96 1907 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 ZBTB39O15060 712 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 PQBP1O60828 265 aaKnown RBP15.57■□□□□ 0.08
TPM3-211ENST00000368531 PPP6R2O75170 966 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 SPATA31C1P0DKV0 1188 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 INSRRP14616 1297 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 LONP1P36776 959 aaKnown RBP15.57■□□□□ 0.08
TPM3-211ENST00000368531 SLC26A2P50443 739 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 RTP1P59025 263 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 ZNF200P98182 395 aaPredicted RBP15.57■□□□□ 0.08
TPM3-211ENST00000368531 PPFIA1Q13136 1202 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 USP49Q70CQ1 688 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 CABP7Q86V35 215 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 NEK9Q8TD19 979 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 KCNG4Q8TDN1 519 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 ATP8B4Q8TF62 1192 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 TRAPPC12Q8WVT3 735 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 TNPO1Q92973 898 aaKnown RBP15.57■□□□□ 0.08
TPM3-211ENST00000368531 HSD17B14Q9BPX1 270 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 ZSWIM4Q9H7M6 989 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 NRBP2Q9NSY0 501 aa15.57■□□□□ 0.08
TPM3-211ENST00000368531 HBP1O60381 514 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 DKC1O60832 514 aaKnown RBP eCLIP15.56■□□□□ 0.08
TPM3-211ENST00000368531 OATP04181 439 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 UBA7P41226 1012 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 HIC1Q14526 733 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 GRIK4Q16099 956 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 ECM1Q16610 540 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 MTERF2Q49AM1 385 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 HAUS3Q68CZ6 603 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 PLA2G4FQ68DD2 849 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 GDF6Q6KF10 455 aaPredicted RBP15.56■□□□□ 0.08
TPM3-211ENST00000368531 NFRKBQ6P4R8 1299 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 POTEGQ6S5H5 508 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 RASSF8Q8NHQ8 419 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 PIGOQ8TEQ8 1089 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 BBXQ8WY36 941 aaPredicted RBP15.56■□□□□ 0.08
TPM3-211ENST00000368531 ZBTB10Q96DT7 871 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 EPSTI1Q96J88 318 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 FAM167AQ96KS9 214 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 AK8Q96MA6 479 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 MMTAG2Q9BU76 263 aaKnown RBP15.56■□□□□ 0.08
TPM3-211ENST00000368531 POLR3CQ9BUI4 534 aaPredicted RBP15.56■□□□□ 0.08
TPM3-211ENST00000368531 SCAND2PQ9GZW5 306 aaPredicted RBP15.56■□□□□ 0.08
TPM3-211ENST00000368531 TRPV6Q9H1D0 765 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 TUFT1Q9NNX1 390 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 TRMT13Q9NUP7 481 aaKnown RBP15.56■□□□□ 0.08
TPM3-211ENST00000368531 GTF2IRD1Q9UHL9 959 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 PCDHA7Q9UN72 937 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 KIAA1024Q9UPX6 916 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 EVPLQ92817 2033 aa15.56■□□□□ 0.08
TPM3-211ENST00000368531 ARID2Q68CP9 1835 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 C17orf102A2RUQ5 167 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 B4GALT4O60513 344 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 CUTAO60888 179 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 STBD1O95210 358 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 RPA1P27694 616 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 CDK7P50613 346 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 TLE2Q04725 743 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 PTGISQ16647 500 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 XKR3Q5GH77 459 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 C4orf19Q8IY42 314 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 SLC43A3Q8NBI5 491 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 SYMPKQ92797 1274 aaKnown RBP15.55■□□□□ 0.08
TPM3-211ENST00000368531 CDK5RAP3Q96JB5 506 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 PANK2Q9BZ23 570 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 DDX19AQ9NUU7 478 aaKnown RBP15.55■□□□□ 0.08
TPM3-211ENST00000368531 NOD1Q9Y239 953 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 STK24Q9Y6E0 443 aa15.55■□□□□ 0.08
TPM3-211ENST00000368531 DCDC2CA8MYV0 355 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 TLR3O15455 904 aaKnown RBP15.54■□□□□ 0.08
TPM3-211ENST00000368531 YWHABP31946 246 aaKnown RBP15.54■□□□□ 0.08
TPM3-211ENST00000368531 NPEPPSP55786 919 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 PTPN11Q06124 597 aaPredicted RBP15.54■□□□□ 0.08
TPM3-211ENST00000368531 SNX17Q15036 470 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 KARSQ15046 597 aaKnown RBP15.54■□□□□ 0.08
TPM3-211ENST00000368531 XKR9Q5GH70 373 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 ANO5Q75V66 913 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 FAM126BQ8IXS8 530 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 DPF3Q92784 378 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 CALML4Q96GE6 196 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 CCDC43Q96MW1 224 aaKnown RBP15.54■□□□□ 0.08
TPM3-211ENST00000368531 PNMA5Q96PV4 448 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 HTATIP2Q9BUP3 242 aa15.54■□□□□ 0.08
TPM3-211ENST00000368531 MORC2Q9Y6X9 1032 aaPredicted RBP15.54■□□□□ 0.08
TPM3-211ENST00000368531 MROH7Q68CQ1 1323 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 NRCAMQ92823 1304 aa15.53■□□□□ 0.08
TPM3-211ENST00000368531 RRN3P2A6NIE6 340 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms