RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 CYLC1P35663 651 aaPredicted RBP27.45■■□□□ 1.98
CLK2-203ENST00000368361 ERCC6LQ2NKX8 1250 aa27.45■■□□□ 1.98
CLK2-203ENST00000368361 CCDC170Q8IYT3 715 aa27.45■■□□□ 1.98
CLK2-203ENST00000368361 REPS2Q8NFH8 660 aa27.45■■□□□ 1.98
CLK2-203ENST00000368361 NEK11Q8NG66 645 aa27.45■■□□□ 1.98
CLK2-203ENST00000368361 NEK9Q8TD19 979 aa27.45■■□□□ 1.98
CLK2-203ENST00000368361 PXMP2Q9NR77 195 aa27.45■■□□□ 1.98
CLK2-203ENST00000368361 PLEKP08567 350 aaPredicted RBP27.44■■□□□ 1.98
CLK2-203ENST00000368361 SLC35F6Q8N357 371 aa27.44■■□□□ 1.98
CLK2-203ENST00000368361 BAP1Q92560 729 aa27.44■■□□□ 1.98
CLK2-203ENST00000368361 PDCD2LQ9BRP1 358 aa27.44■■□□□ 1.98
CLK2-203ENST00000368361 TFR2Q9UP52 801 aa27.44■■□□□ 1.98
CLK2-203ENST00000368361 LRRC53A6NM62 1247 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 PRKG1Q13976 671 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 RRAGAQ7L523 313 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 KCND2Q9NZV8 630 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 POLR2AP24928 1970 aaKnown RBP27.43■■□□□ 1.98
CLK2-203ENST00000368361 C19orf81C9J6K1 198 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 KRT83P78385 493 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 SNRNP48Q6IEG0 339 aaKnown RBP27.43■■□□□ 1.98
CLK2-203ENST00000368361 MNS1Q8NEH6 495 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 FIZ1Q96SL8 496 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 FAM184BQ9ULE4 1060 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 SAMM50Q9Y512 469 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 PPP2R3BQ9Y5P8 575 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 LOXHD1Q8IVV2 1947 aa27.43■■□□□ 1.98
CLK2-203ENST00000368361 P4HBP07237 508 aaKnown RBP27.42■■□□□ 1.98
CLK2-203ENST00000368361 DSG3P32926 999 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 ZNF131P52739 623 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 BAATQ14032 418 aaPredicted RBP27.42■■□□□ 1.98
CLK2-203ENST00000368361 ZC2HC1CQ53FD0 456 aaPredicted RBP27.42■■□□□ 1.98
CLK2-203ENST00000368361 ARHGEF16Q5VV41 709 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 CRACR2AQ9BSW2 395 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 ARHGAP20Q9P2F6 1191 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 GUCA1BQ9UMX6 200 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 EIF3CLB5ME19 914 aaKnown RBP27.42■■□□□ 1.98
CLK2-203ENST00000368361 EIF3DO15371 548 aaKnown RBP eCLIP27.42■■□□□ 1.98
CLK2-203ENST00000368361 EIF3CQ99613 913 aaKnown RBP27.42■■□□□ 1.98
CLK2-203ENST00000368361 ZNF214Q9UL59 606 aaPredicted RBP27.42■■□□□ 1.98
CLK2-203ENST00000368361 ODF2LQ9ULJ1 636 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 ADAMTS5Q9UNA0 930 aa27.42■■□□□ 1.98
CLK2-203ENST00000368361 ZMYM2Q9UBW7 1377 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 ARHGEF35A5YM69 484 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 AKAP3O75969 853 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 NOL4O94818 638 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 NR3C1P04150 777 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 KCNH2Q12809 1159 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 CACNA2D4Q7Z3S7 1137 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 FRMD5Q7Z6J6 570 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 IKZF4Q9H2S9 585 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 HAUS4Q9H6D7 363 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 ZSWIM4Q9H7M6 989 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 MYO1AQ9UBC5 1043 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 SRCAPQ6ZRS2 3230 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 CLIC2O15247 247 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 TGFB1I1O43294 461 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 COG2Q14746 738 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 GPIHBP1Q8IV16 184 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 CCDC42Q96M95 316 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 TBC1D22BQ9NU19 505 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 SEL1LQ9UBV2 794 aa27.41■■□□□ 1.98
CLK2-203ENST00000368361 ARMCX3Q9UH62 379 aaPredicted RBP27.41■■□□□ 1.98
CLK2-203ENST00000368361 ATP9AO75110 1047 aa27.4■■□□□ 1.98
CLK2-203ENST00000368361 KSR1Q8IVT5 923 aa27.4■■□□□ 1.98
CLK2-203ENST00000368361 LSM14BQ9BX40 385 aaKnown RBP27.4■■□□□ 1.98
CLK2-203ENST00000368361 EDEM3Q9BZQ6 932 aa27.4■■□□□ 1.98
CLK2-203ENST00000368361 MYH11P35749 1972 aa27.4■■□□□ 1.98
CLK2-203ENST00000368361 SBF1O95248 1867 aa27.4■■□□□ 1.98
CLK2-203ENST00000368361 TESPA1A2RU30 521 aaPredicted RBP27.39■■□□□ 1.98
CLK2-203ENST00000368361 IPO7O95373 1038 aaKnown RBP27.39■■□□□ 1.98
CLK2-203ENST00000368361 GUCY2CP25092 1073 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 CYP27A1Q02318 531 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 APBA1Q02410 837 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 PPP2R3AQ06190 1150 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 TMEM132BQ14DG7 1078 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 NOL9Q5SY16 702 aaKnown RBP27.39■■□□□ 1.98
CLK2-203ENST00000368361 PDXDC1Q6P996 788 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 DLK2Q6UY11 383 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 CATSPERGQ6ZRH7 1159 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 ZNF720Q7Z2F6 126 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 KIAA1328Q86T90 577 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 FAM178BQ8IXR5 827 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.39■■□□□ 1.988e-7■■□□□ 14.4
CLK2-203ENST00000368361 UPF1Q92900 1129 aaKnown RBP eCLIP27.39■■□□□ 1.98
CLK2-203ENST00000368361 NLRC4Q9NPP4 1024 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 CEP72Q9P209 647 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 AFG3L2Q9Y4W6 797 aa27.39■■□□□ 1.98
CLK2-203ENST00000368361 CTAGE9A4FU28 777 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 RCCD1A6NED2 376 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 ZNF263O14978 683 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 TADA3O75528 432 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 RPL13P26373 211 aaKnown RBP27.39■■□□□ 1.97
CLK2-203ENST00000368361 CASP4P49662 377 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 OAZ1P54368 228 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 SUPT20HL1Q3ZLR7 823 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 ODR4Q5SWX8 454 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 CCDC122Q5T0U0 273 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 PADI6Q6TGC4 694 aa27.39■■□□□ 1.97
CLK2-203ENST00000368361 CGNQ9P2M7 1197 aaKnown RBP27.39■■□□□ 1.97
CLK2-203ENST00000368361 HIP1RO75146 1068 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms