RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RFC2P35250 354 aa25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 SPIRE1Q08AE8 756 aa25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 MBTPS1Q14703 1052 aa25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 RASIP1Q5U651 963 aa25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 PSRC1Q6PGN9 363 aaPredicted RBP25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 DEFB128Q7Z7B8 93 aa25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 RPUSD2Q8IZ73 545 aaKnown RBP25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 ATP2B1P20020 1258 aa25.29■■□□□ 1.64
ECHDC1-203ENST00000368291 THPOP40225 353 aa25.29■■□□□ 1.64
ECHDC1-203ENST00000368291 RPAINQ86UA6 219 aa25.29■■□□□ 1.64
ECHDC1-203ENST00000368291 RNPC3Q96LT9 517 aaKnown RBP25.29■■□□□ 1.64
ECHDC1-203ENST00000368291 MTMR9Q96QG7 549 aa25.29■■□□□ 1.64
ECHDC1-203ENST00000368291 TMEM60Q9H2L4 133 aa25.29■■□□□ 1.64
ECHDC1-203ENST00000368291 GBF1Q92538 1859 aa25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 PTPRSQ13332 1948 aa25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 NBNO60934 754 aa25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 FGBP02675 491 aa25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 SLFN12Q8IYM2 578 aa25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 BBXQ8WY36 941 aaPredicted RBP25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 HERVK_113Q902F9 699 aa25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 TNPO1Q92973 898 aaKnown RBP25.28■■□□□ 1.64
ECHDC1-203ENST00000368291 COL1A2P08123 1366 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 K7ELQ4 463 aaPredicted RBP25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 NEMFO60524 1076 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 CAND2O75155 1236 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 PFKMP08237 780 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 MCM7P33993 719 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 TOB1P50616 345 aaPredicted RBP25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 GNL2Q13823 731 aaKnown RBP25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 CALCRLQ16602 461 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 CKAP2LQ8IYA6 745 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 SNX21Q969T3 373 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 LRCH3Q96II8 777 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 OSBPL7Q9BZF2 842 aa25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 CXXC1Q9P0U4 656 aaPredicted RBP25.27■■□□□ 1.64
ECHDC1-203ENST00000368291 RSPH10B2B2RC85 870 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 STBD1O95210 358 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 BAG4O95429 457 aaKnown RBP25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 CXCL10P02778 98 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 RSPH10BP0C881 870 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 ZNF484Q5JVG2 852 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 TAF2Q6P1X5 1199 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 MTHFD1LQ6UB35 978 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 OTOP2Q7RTS6 562 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 TRMT1LQ7Z2T5 733 aaKnown RBP25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 PCDHA2Q9Y5H9 948 aa25.26■■□□□ 1.63
ECHDC1-203ENST00000368291 MICAL3Q7RTP6 2002 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 PARNO95453 639 aaKnown RBP25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 KLRC1P26715 233 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 PRKCEQ02156 737 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 NBR1Q14596 966 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 ZNF174Q15697 407 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 TCTN1Q2MV58 587 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 FAM26DQ5JW98 314 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 LARP1BQ659C4 914 aaKnown RBP25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 DNAJB3Q8WWF6 145 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 SZT2Q5T011 3432 aa25.25■■□□□ 1.63
ECHDC1-203ENST00000368291 MARCH6O60337 910 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 OATP04181 439 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 CTSHP09668 335 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 TRAPPC10P48553 1259 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 TTC38Q5R3I4 469 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 BANK1Q8NDB2 785 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 INTS4Q96HW7 963 aaKnown RBP25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 FAM167AQ96KS9 214 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 PCDHA12Q9UN75 941 aa25.24■■□□□ 1.63
ECHDC1-203ENST00000368291 ARID2Q68CP9 1835 aa25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 SMIM35A0A1B0GVV1 85 aa25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 CHRNA1P02708 482 aa25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 MGAT3Q09327 533 aa25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 ORC2Q13416 577 aaPredicted RBP25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 EPHA7Q15375 998 aa25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 MCTP1Q6DN14 999 aa25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 FAM109BQ6ICB4 259 aaPredicted RBP25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 TTC12Q9H892 705 aaPredicted RBP25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 WRAP73Q9P2S5 460 aaPredicted RBP25.23■■□□□ 1.63
ECHDC1-203ENST00000368291 H3BQV1 296 aa25.22■■□□□ 1.63
ECHDC1-203ENST00000368291 TXKP42681 527 aa25.22■■□□□ 1.63
ECHDC1-203ENST00000368291 NCAPH2Q6IBW4 605 aa25.22■■□□□ 1.63
ECHDC1-203ENST00000368291 C4orf32Q8N8J7 132 aa25.22■■□□□ 1.63
ECHDC1-203ENST00000368291 FTOQ9C0B1 505 aaKnown RBP eCLIP25.22■■□□□ 1.63
ECHDC1-203ENST00000368291 FAM49AQ9H0Q0 323 aaPredicted RBP25.22■■□□□ 1.63
ECHDC1-203ENST00000368291 TMEM150BA6NC51 233 aa25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 C22orf31O95567 290 aa25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 PSMC5P62195 406 aa25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 TARBP2Q15633 366 aaKnown RBP25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 CEP89Q96ST8 783 aa25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 NRBP2Q9NSY0 501 aa25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 NOL7Q9UMY1 257 aaKnown RBP25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 PCDHB6Q9Y5E3 794 aa25.21■■□□□ 1.63
ECHDC1-203ENST00000368291 P4HBP07237 508 aaKnown RBP25.2■■□□□ 1.63
ECHDC1-203ENST00000368291 XKR3Q5GH77 459 aa25.2■■□□□ 1.63
ECHDC1-203ENST00000368291 NIFKQ9BYG3 293 aaKnown RBP25.2■■□□□ 1.63
ECHDC1-203ENST00000368291 RGL1Q9NZL6 768 aa25.2■■□□□ 1.63
ECHDC1-203ENST00000368291 QARSP47897 775 aaKnown RBP25.19■■□□□ 1.62
ECHDC1-203ENST00000368291 PLEKHG4Q58EX7 1191 aa25.19■■□□□ 1.62
ECHDC1-203ENST00000368291 CNKSR3Q6P9H4 555 aa25.19■■□□□ 1.62
ECHDC1-203ENST00000368291 ANO5Q75V66 913 aa25.19■■□□□ 1.62
ECHDC1-203ENST00000368291 RSPH3Q86UC2 560 aa25.19■■□□□ 1.62
ECHDC1-203ENST00000368291 KIAA0319LQ8IZA0 1049 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms