RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TCF25Q9BQ70 676 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 AAASQ9NRG9 546 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 MAP3K20Q9NYL2 800 aaKnown RBP17.01■□□□□ 0.31
VAMP4-202ENST00000367740 LIMD1Q9UGP4 676 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 PADI3Q9ULW8 664 aa17.01■□□□□ 0.31
VAMP4-202ENST00000367740 DHX16O60231 1041 aaKnown RBP17■□□□□ 0.31
VAMP4-202ENST00000367740 PPP1R11O60927 126 aaPredicted RBP17■□□□□ 0.31
VAMP4-202ENST00000367740 FGAP02671 866 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 ITIH3Q06033 890 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 PPFIA1Q13136 1202 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 NEDD9Q14511 834 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 GRIK4Q16099 956 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 ASPRV1Q53RT3 343 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 MARCH8Q5T0T0 291 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 CES5AQ6NT32 575 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 MIER1Q8N108 512 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 CASP10Q92851 521 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
VAMP4-202ENST00000367740 HINFPQ9BQA5 517 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 RTP3Q9BQQ7 232 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 AMNQ9BXJ7 453 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 TMX1Q9H3N1 280 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 VAT1LQ9HCJ6 419 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 ENTPD7Q9NQZ7 604 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 LRFN2Q9ULH4 789 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 LZTS1Q9Y250 596 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 SQORQ9Y6N5 450 aa17■□□□□ 0.31
VAMP4-202ENST00000367740 WEE2P0C1S8 567 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 IBSPP21815 317 aaPredicted RBP16.99■□□□□ 0.31
VAMP4-202ENST00000367740 HAND2P61296 217 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 MRPS9P82933 396 aaKnown RBP16.99■□□□□ 0.31
VAMP4-202ENST00000367740 SP4Q02446 784 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 RSPO4Q2I0M5 234 aaPredicted RBP16.99■□□□□ 0.31
VAMP4-202ENST00000367740 GNPTABQ3T906 1256 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 TBC1D10CQ8IV04 446 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 DCLK2Q8N568 766 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 MRPS27Q92552 414 aaKnown RBP16.99■□□□□ 0.31
VAMP4-202ENST00000367740 ZBTB10Q96DT7 871 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 ERVK-5Q9HDB9 667 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 HCFC2Q9Y5Z7 792 aa16.99■□□□□ 0.31
VAMP4-202ENST00000367740 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 NEDD4P46934 1319 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 IGSF9BQ9UPX0 1349 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 TBKBP1A7MCY6 615 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 SPATA31C2B4DYI2 1134 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 MTHFRP42898 656 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 SARSP49591 514 aaKnown RBP16.98■□□□□ 0.31
VAMP4-202ENST00000367740 PAK2Q13177 524 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 ST3GAL2Q16842 350 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 RUBCNQ92622 972 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 CWH43Q9H720 699 aa16.98■□□□□ 0.31
VAMP4-202ENST00000367740 TYW1Q9NV66 732 aaKnown RBP16.98■□□□□ 0.31
VAMP4-202ENST00000367740 FRMPD4Q14CM0 1322 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 FIBPO43427 364 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 MS4A1P11836 297 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 MARK3P27448 753 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 TCF7P36402 384 aaPredicted RBP16.97■□□□□ 0.31
VAMP4-202ENST00000367740 PLCB3Q01970 1234 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 SIX5Q8N196 739 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 FAM49AQ9H0Q0 323 aaPredicted RBP16.97■□□□□ 0.31
VAMP4-202ENST00000367740 NGRNQ9NPE2 291 aaKnown RBP16.97■□□□□ 0.31
VAMP4-202ENST00000367740 USTQ9Y2C2 406 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 TRPV2Q9Y5S1 764 aa16.97■□□□□ 0.31
VAMP4-202ENST00000367740 MGEA5O60502 916 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 TMEM62Q0P6H9 643 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 IER5Q5VY09 327 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 KIAA1841Q6NSI8 718 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 MFSD6Q6ZSS7 791 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 PLCD3Q8N3E9 789 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 RIN2Q8WYP3 895 aaPredicted RBP16.96■□□□□ 0.31
VAMP4-202ENST00000367740 KAT14Q9H8E8 782 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 DUSP12Q9UNI6 340 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 PCDHB7Q9Y5E2 793 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 C2orf16Q68DN1 1984 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 GPR179Q6PRD1 2367 aa16.96■□□□□ 0.31
VAMP4-202ENST00000367740 STAM2O75886 525 aa16.95■□□□□ 0.3
VAMP4-202ENST00000367740 EOMESO95936 686 aa16.95■□□□□ 0.3
VAMP4-202ENST00000367740 PARP1P09874 1014 aaKnown RBP16.95■□□□□ 0.3
VAMP4-202ENST00000367740 PCP11498 1178 aaKnown RBP16.95■□□□□ 0.3
VAMP4-202ENST00000367740 LAG3P18627 525 aa16.95■□□□□ 0.3
VAMP4-202ENST00000367740 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
VAMP4-202ENST00000367740 RARS2Q5T160 578 aaKnown RBP16.95■□□□□ 0.3
VAMP4-202ENST00000367740 MTMR8Q96EF0 704 aa16.95■□□□□ 0.3
VAMP4-202ENST00000367740 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
VAMP4-202ENST00000367740 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 GCOM1H8Y6P7 765 aaPredicted RBP16.94■□□□□ 0.3
VAMP4-202ENST00000367740 ZBTB5O15062 677 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 RPLP2P05387 115 aaKnown RBP16.94■□□□□ 0.3
VAMP4-202ENST00000367740 POLR2MP0CAP2 368 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 PDE4AP27815 886 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 IGBP1P78318 339 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 TDGQ13569 410 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms