RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CORO1CQ9ULV4 474 aaPredicted RBP16.28■□□□□ 0.2
UBAP1-202ENST00000359544 PP2D1A8MPX8 630 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 CCDC188H7C350 402 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 GPSM2P81274 684 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 TMC4Q7Z404 712 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 TMC3Q7Z5M5 1100 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 NSRP1Q9H0G5 558 aaKnown RBP16.27■□□□□ 0.2
UBAP1-202ENST00000359544 LUC7L3O95232 432 aaKnown RBP16.27■□□□□ 0.2
UBAP1-202ENST00000359544 CCND1P24385 295 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 KLRC1P26715 233 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 RBBP5Q15291 538 aaKnown RBP16.27■□□□□ 0.2
UBAP1-202ENST00000359544 MIS18BP1Q6P0N0 1132 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 PIGWQ7Z7B1 504 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 TBC1D1Q86TI0 1168 aaPredicted RBP16.27■□□□□ 0.2
UBAP1-202ENST00000359544 ZNF317Q96PQ6 595 aaPredicted RBP16.27■□□□□ 0.2
UBAP1-202ENST00000359544 PLIN2Q99541 437 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 CEP72Q9P209 647 aa16.27■□□□□ 0.2
UBAP1-202ENST00000359544 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 F8VZ95 297 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SNAP23O00161 211 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 KCNK3O14649 394 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 FCER1AP12319 257 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 PRPHP41219 470 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 PPARDQ03181 441 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 IFI16Q16666 785 aaKnown RBP16.26■□□□□ 0.19
UBAP1-202ENST00000359544 DPP8Q6V1X1 898 aaPredicted RBP16.26■□□□□ 0.19
UBAP1-202ENST00000359544 TRPM8Q7Z2W7 1104 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SP8Q8IXZ3 490 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SRBD1Q8N5C6 995 aaKnown RBP16.26■□□□□ 0.19
UBAP1-202ENST00000359544 AK8Q96MA6 479 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 ETAA1Q9NY74 926 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 PACSIN2Q9UNF0 486 aaPredicted RBP16.26■□□□□ 0.19
UBAP1-202ENST00000359544 BTNL10A8MVZ5 291 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 PGRMC1O00264 195 aaKnown RBP16.26■□□□□ 0.19
UBAP1-202ENST00000359544 RIMBP2O15034 1052 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SART1O43290 800 aaKnown RBP16.26■□□□□ 0.19
UBAP1-202ENST00000359544 PCP11498 1178 aaKnown RBP16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SLC5A1P13866 664 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 RWDD2BP57060 319 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 INHBEP58166 350 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SLC18A3Q16572 532 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 AOC3Q16853 763 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 CABP7Q86V35 215 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 CCDC26Q8TAB7 109 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 AGAP11Q8TF27 550 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 NEUROG2Q9H2A3 272 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 SLITRK6Q9H5Y7 841 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 FAM114A2Q9NRY5 505 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 FER1L6Q2WGJ9 1857 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 CCDC88AQ3V6T2 1871 aa16.26■□□□□ 0.19
UBAP1-202ENST00000359544 COL4A5P29400 1685 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 CCDC194A0A1B0GVG4 234 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 MMEP08473 750 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 PLCG1P19174 1290 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 PEX19P40855 299 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 RASGRF1Q13972 1273 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 SEPT2Q15019 361 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 DDX42Q86XP3 938 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBAP1-202ENST00000359544 HELBQ8NG08 1087 aaPredicted RBP16.25■□□□□ 0.19
UBAP1-202ENST00000359544 MICAL1Q8TDZ2 1067 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 ZNF570Q96NI8 536 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 SH3GLB2Q9NR46 395 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 L3MBTL1Q9Y468 752 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 DCDC2CA8MYV0 355 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBAP1-202ENST00000359544 KIF4AO95239 1232 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 NQO1P15559 274 aaKnown RBP16.25■□□□□ 0.19
UBAP1-202ENST00000359544 HOXA7P31268 230 aaPredicted RBP16.25■□□□□ 0.19
UBAP1-202ENST00000359544 USP11P51784 963 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 POLLQ9UGP5 575 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 PCDHA4Q9UN74 947 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 SBF1O95248 1867 aa16.25■□□□□ 0.19
UBAP1-202ENST00000359544 CEP104O60308 925 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 FGFR2P21802 821 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 LRRC63Q05C16 580 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 DHX9Q08211 1270 aaKnown RBP16.24■□□□□ 0.19
UBAP1-202ENST00000359544 SOGA3Q5TF21 947 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 GPIHBP1Q8IV16 184 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 KIAA0895Q8NCT3 520 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 ANKRD27Q96NW4 1050 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.24■□□□□ 0.197e-7■■□□□ 13.4
UBAP1-202ENST00000359544 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
UBAP1-202ENST00000359544 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 ANKIB1Q9P2G1 1089 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 MYH7BA7E2Y1 1941 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 MROH5Q6ZUA9 1318 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 SNUPNO95149 360 aaKnown RBP16.24■□□□□ 0.19
UBAP1-202ENST00000359544 CHN1P15882 459 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 ZNF131P52739 623 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 C10orf76Q5T2E6 689 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 MDM1Q8TC05 714 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 KCNMB3Q9NPA1 279 aa16.24■□□□□ 0.19
UBAP1-202ENST00000359544 EME2A4GXA9 379 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms