RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 DDX12PQ92771 950 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 EIF2AK1Q9BQI3 630 aaKnown RBP11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 TIPINQ9BVW5 301 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 THAP9Q9H5L6 903 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 KCNH7Q9NS40 1196 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 BLOC1S4Q9NUP1 217 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 VAV3Q9UKW4 847 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 ZNF214Q9UL59 606 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 CTNND2Q9UQB3 1225 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 PARP14Q460N5 1801 aa11.94□□□□□ -0.5
TRAPPC4-201ENST00000359005 PLXNB2O15031 1838 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 PGK2P07205 417 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 MYCLP12524 364 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 BMP6P22004 513 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 SPIRE1Q08AE8 756 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 BAATQ14032 418 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 STXBP2Q15833 593 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 MUM1L1Q5H9M0 696 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 KCNV1Q6PIU1 500 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 GPBP1Q86WP2 473 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 CATSPER3Q86XQ3 398 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 SPC24Q8NBT2 197 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 SLC17A8Q8NDX2 589 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 CCDC112Q8NEF3 446 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 SHCBP1Q8NEM2 672 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 TBC1D5Q92609 795 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 MTRQ99707 1265 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 PDCD2LQ9BRP1 358 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 XPO4Q9C0E2 1151 aaKnown RBP11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 MROH8Q9H579 483 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 ZSWIM4Q9H7M6 989 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 PANK4Q9NVE7 773 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 SEL1LQ9UBV2 794 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 KCNG1Q9UIX4 513 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 COL4A3BPQ9Y5P4 624 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 DNAH12Q6ZR08 3092 aa11.93□□□□□ -0.5
TRAPPC4-201ENST00000359005 MGAMO43451 1857 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 MYMKA6NI61 221 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 WDR64B1ANS9 1081 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 CCP110O43303 1012 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 KLRC4O43908 158 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 GNA14O95837 355 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 NR3C2P08235 984 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 COL6A1P12109 1028 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 ABCD1P33897 745 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 PRCPP42785 496 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 TRIM14Q14142 442 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 ZNF746Q6NUN9 644 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 TPH2Q8IWU9 490 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 SMAP1Q8IYB5 467 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 MYOCDQ8IZQ8 938 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 P2RX5Q93086 422 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 TAAR1Q96RJ0 339 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 PRO3102Q9H379 93 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 AGO4Q9HCK5 861 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 CYP39A1Q9NYL5 469 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
TRAPPC4-201ENST00000359005 NFASCO94856 1347 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 A0A087WWV3 80 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 E9PMD0 336 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 STRNO43815 780 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 MED24O75448 989 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 EIF3JO75822 258 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 CYBAP13498 195 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 ZNF18P17022 549 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 TAL1P17542 331 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 SFPQP23246 707 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 CASP1P29466 404 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 KCTD2Q14681 263 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 HERC4Q5GLZ8 1057 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 FAM26FQ5R3K3 315 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 CDKAL1Q5VV42 579 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 MFSD14CQ5VZR4 134 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 OTUD6AQ7L8S5 288 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 DYMQ7RTS9 669 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 CCDC186Q7Z3E2 898 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 NECAB2Q7Z6G3 386 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 DPP9Q86TI2 863 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 TRMT44Q8IYL2 757 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 CSGALNACT2Q8N6G5 542 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 HSD17B14Q9BPX1 270 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 ODF2LQ9ULJ1 636 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 IVNS1ABPQ9Y6Y0 642 aa11.91□□□□□ -0.5
TRAPPC4-201ENST00000359005 RLFQ13129 1914 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 ARHGEF35A5YM69 484 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 KCNJ18B7U540 433 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 CHMP2AO43633 222 aa11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 ZNF500O60304 480 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-201ENST00000359005 LYPLA2O95372 231 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms