RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 DBNDD1Q9H9R9 158 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 PRR12Q9ULL5 1215 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 TTI1O43156 1089 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 PRPSAP2O60256 369 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 IREB2P48200 963 aaKnown RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 TRPC1P48995 793 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 ST8SIA6P61647 398 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 CYP27A1Q02318 531 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 DEPDC1Q5TB30 811 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 RNASE11Q8TAA1 199 aaKnown RBP10.48□□□□□ -0.73
CHD3-202ENST00000358181 NRBF2Q96F24 287 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 CHAMP1Q96JM3 812 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 PARVBQ9HBI1 364 aa10.48□□□□□ -0.73
CHD3-202ENST00000358181 DFFAO00273 331 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 PLS3P13797 630 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 ICA1Q05084 483 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 GAS2L3Q86XJ1 694 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 GJA10Q969M2 543 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 SP110Q9HB58 689 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 ZC3H4Q9UPT8 1303 aaKnown RBP10.47□□□□□ -0.73
CHD3-202ENST00000358181 FYNP06241 537 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 MCF2P10911 925 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 ABCB5Q2M3G0 1257 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 DCUN1D1Q96GG9 259 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 DBNLQ9UJU6 430 aaKnown RBP10.47□□□□□ -0.73
CHD3-202ENST00000358181 KCNH3Q9ULD8 1083 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 CLUP10909 449 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 MYL5Q02045 173 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 PTPN21Q16825 1174 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 ANKRD40Q6AI12 368 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 COMMD2Q86X83 199 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 REXO1Q8N1G1 1221 aaKnown RBP10.47□□□□□ -0.73
CHD3-202ENST00000358181 PPP2R3CQ969Q6 453 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 GLT8D2Q9H1C3 349 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 MFSD1Q9H3U5 465 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 LRRN2O75325 713 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 MYO1DO94832 1006 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 HOXD10P28358 340 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 NCALDP61601 193 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 UVSSAQ2YD98 709 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 USPL1Q5W0Q7 1092 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 CCT7Q99832 543 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 CARD6Q9BX69 1037 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 QTRT2Q9H974 415 aaKnown RBP10.47□□□□□ -0.73
CHD3-202ENST00000358181 SUN2Q9UH99 717 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 ASAP1Q9ULH1 1129 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 SOAT1P35610 550 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 TSPY1Q01534 308 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 KRT39Q6A163 491 aa10.47□□□□□ -0.73
CHD3-202ENST00000358181 DNAJC17Q9NVM6 304 aaKnown RBP10.47□□□□□ -0.73
CHD3-202ENST00000358181 UTP6Q9NYH9 597 aaKnown RBP10.47□□□□□ -0.73
CHD3-202ENST00000358181 TAC1P20366 129 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 ALDH18A1P54886 795 aaKnown RBP10.46□□□□□ -0.73
CHD3-202ENST00000358181 MTX1Q13505 466 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 CEP78Q5JTW2 689 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 ZNF280CQ8ND82 737 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.73
CHD3-202ENST00000358181 ATP6V1C1P21283 382 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 MAPK4P31152 587 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 CNPY4Q8N129 248 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 JPH2Q9BR39 696 aaPredicted RBP10.46□□□□□ -0.73
CHD3-202ENST00000358181 CENPKQ9BS16 269 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 ING2Q9H160 280 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 RASSF4Q9H2L5 321 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 SMYD3Q9H7B4 428 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 KDM3AQ9Y4C1 1321 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 MEIS1O00470 390 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 MAP4P27816 1152 aaKnown RBP10.46□□□□□ -0.73
CHD3-202ENST00000358181 LTKP29376 864 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 SSTR3P32745 418 aaPredicted RBP10.46□□□□□ -0.73
CHD3-202ENST00000358181 GCKRQ14397 625 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 ARHGEF3Q9NR81 526 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 SCINQ9Y6U3 715 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 CAPN7Q9Y6W3 813 aa10.46□□□□□ -0.73
CHD3-202ENST00000358181 FAM47E-STBD1D6RA91 191 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 TIPRLO75663 272 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 CTSWP56202 376 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 PTK2Q05397 1052 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 SPDYAQ5MJ70 313 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 BRAPQ7Z569 592 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 FLCNQ8NFG4 579 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 SPACA7Q96KW9 195 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 FAM161BQ96MY7 647 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 LRRC37BQ96QE4 947 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 EFHD1Q9BUP0 239 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 ASCC2Q9H1I8 757 aaPredicted RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 TYW1Q9NV66 732 aaKnown RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 KIF28PB7ZC32 967 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 C5orf58C9J3I9 102 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 TFRCP02786 760 aaKnown RBP10.46□□□□□ -0.74
CHD3-202ENST00000358181 ARHGAP25P42331 645 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 PNOCQ13519 176 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 DDIASQ8IXT1 998 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 TBC1D19Q8N5T2 526 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 HES6Q96HZ4 224 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 SLC39A2Q9NP94 309 aa10.46□□□□□ -0.74
CHD3-202ENST00000358181 ANGEL1Q9UNK9 670 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms