RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CEP72Q9P209 647 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 CORO1CQ9ULV4 474 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 G3BP2Q9UN86 482 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 NOVA2Q9UNW9 492 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 SSU72P8A0A1W2PR75 194 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 TLDC2A0PJX2 215 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 GRID2IPA4D2P6 1211 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 KRIT1O00522 736 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 RASA1P20936 1047 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 HSD17B3P37058 310 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 ERVK-9P63128 1117 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 NAB2Q15742 525 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 CDC37Q16543 378 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 ECM1Q16610 540 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 ASTE1Q2TB18 679 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 HHATQ5VTY9 493 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 TBC1D9BQ66K14 1250 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 MFN1Q8IWA4 741 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 DAGLBQ8NCG7 672 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 B4GALNT2Q8NHY0 566 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 IQCDQ96DY2 449 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 TAF1DQ9H5J8 278 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 SEPT11Q9NVA2 429 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 LMCD1Q9NZU5 365 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 BAIAP2L1Q9UHR4 511 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 NUP98P52948 1817 aa8.98□□□□□ -0.97
CDC42SE1-201ENST00000357235 PVALEFA0A1B0GWK0 134 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PJA2O43164 708 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SART1O43290 800 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 DAPK3O43293 454 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SMNDC1O75940 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 NOL4O94818 638 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SLC9A1P19634 815 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 MAGEA8P43361 318 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 RANBP1P43487 201 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 CDK8P49336 464 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PAPOLAP51003 745 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 ADCY7P51828 1080 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PTK2Q05397 1052 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SLMAPQ14BN4 828 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 KRT71Q3SY84 523 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 CPLX4Q7Z7G2 160 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 USP38Q8NB14 1042 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 WHAMMQ8TF30 809 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 ANKS1AQ92625 1134 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 CELF4Q9BZC1 486 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 STK17AQ9UEE5 414 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SRP68Q9UHB9 627 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 KIF4AO95239 1232 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 LCA5LO95447 670 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 ITGA4P13612 1032 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 NR2F2P24468 414 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SLC16A2P36021 539 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 FLT3P36888 993 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 MEI1Q5TIA1 1274 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 ZNF572Q7Z3I7 529 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PEX26Q7Z412 305 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SPATA21Q7Z572 469 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 UHMK1Q8TAS1 419 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 CYFIP2Q96F07 1278 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 STAMBPL1Q96FJ0 436 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 C8orf37Q96NL8 207 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 NOD2Q9HC29 1040 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PAPOLBQ9NRJ5 636 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 RGL1Q9NZL6 768 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 FBXL5Q9UKA1 691 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PCDHA12Q9UN75 941 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 COL4A1P02462 1669 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 TOGARAM1Q9Y4F4 1720 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PHF20L1A8MW92 1017 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 DCDC2CA8MYV0 355 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 HMGB1P1B2RPK0 211 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 MGRN1O60291 552 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 ABCB4P21439 1286 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 COPB2P35606 906 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 MAGOHP61326 146 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 KCNH2Q12809 1159 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 ITGB3BPQ13352 177 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 CWF19L1Q69YN2 538 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 DAAM2Q86T65 1068 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 GPBP1Q86WP2 473 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 CUL5Q93034 780 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 MAGOHBQ96A72 148 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 INPP4AQ96PE3 977 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 RIC8AQ9NPQ8 531 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 RNF14Q9UBS8 474 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 DDX25Q9UHL0 483 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 ATP8A1Q9Y2Q0 1164 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 C15orf41Q9Y2V0 281 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 PCDHGC5Q9Y5F6 944 aa8.97□□□□□ -0.97
CDC42SE1-201ENST00000357235 TAF1P21675 1872 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 POTEB3A0JP26 581 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 POTECB2RU33 542 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 F8W031 263 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 MEIS1O00470 390 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 OPLAHO14841 1288 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 FAM107AO95990 144 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 ABCD1P33897 745 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms