RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 OATP04181 439 aa17.41■□□□□ 0.38
TRIM13-201ENST00000356017 CCT6AP40227 531 aaKnown RBP17.41■□□□□ 0.38
TRIM13-201ENST00000356017 PRKCEQ02156 737 aa17.41■□□□□ 0.38
TRIM13-201ENST00000356017 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
TRIM13-201ENST00000356017 UGCGQ16739 394 aa17.41■□□□□ 0.38
TRIM13-201ENST00000356017 GRIN2DO15399 1336 aa17.41■□□□□ 0.38
TRIM13-201ENST00000356017 MYH15Q9Y2K3 1946 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 RRN3P2A6NIE6 340 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 SPATA31C1P0DKV0 1188 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 SMIM10L2AP0DMW4 78 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 SMIM10L2BP0DMW5 78 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.388e-7■■□□□ 11.8
TRIM13-201ENST00000356017 ATP4AP20648 1035 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 TXLNAP40222 546 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 CDK7P50613 346 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 ATN1P54259 1190 aaPredicted RBP17.4■□□□□ 0.38
TRIM13-201ENST00000356017 SNX17Q15036 470 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 FAM47CQ5HY64 1035 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 CLIC6Q96NY7 704 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 GTF2IRD1Q9UHL9 959 aa17.4■□□□□ 0.38
TRIM13-201ENST00000356017 PP2D1A8MPX8 630 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 CDC25AP30304 524 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 GRIN1Q05586 938 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 PPFIA1Q13136 1202 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 CALML4Q96GE6 196 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 CHAMP1Q96JM3 812 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 TOX2Q96NM4 488 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 NACC1Q96RE7 527 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 HTATIP2Q9BUP3 242 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 CCSER1Q9C0I3 900 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 PCDHA7Q9UN72 937 aa17.39■□□□□ 0.38
TRIM13-201ENST00000356017 SCN10AQ9Y5Y9 1956 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 COL1A2P08123 1366 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 C17orf102A2RUQ5 167 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 DDX11L8A8MPP1 907 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 MED24O75448 989 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 INSRRP14616 1297 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 YWHABP31946 246 aaKnown RBP17.39■□□□□ 0.37
TRIM13-201ENST00000356017 ZNF484Q5JVG2 852 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
TRIM13-201ENST00000356017 ANKRD33Q7Z3H0 272 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 CABP7Q86V35 215 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 MMTAG2Q9BU76 263 aaKnown RBP17.39■□□□□ 0.37
TRIM13-201ENST00000356017 NIFKQ9BYG3 293 aaKnown RBP17.39■□□□□ 0.37
TRIM13-201ENST00000356017 WRAP73Q9P2S5 460 aaPredicted RBP17.39■□□□□ 0.37
TRIM13-201ENST00000356017 PPME1Q9Y570 386 aa17.39■□□□□ 0.37
TRIM13-201ENST00000356017 DCDC2CA8MYV0 355 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 TLR3O15455 904 aaKnown RBP17.38■□□□□ 0.37
TRIM13-201ENST00000356017 HOXC8P31273 242 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 GRIK4Q16099 956 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 HYIQ5T013 277 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 AXDND1Q5T1B0 1012 aaPredicted RBP17.38■□□□□ 0.37
TRIM13-201ENST00000356017 ADALQ6DHV7 355 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 ANO5Q75V66 913 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 RASSF8Q8NHQ8 419 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 SETD4Q9NVD3 440 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 CCDC39Q9UFE4 941 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
TRIM13-201ENST00000356017 KIAA1024Q9UPX6 916 aa17.38■□□□□ 0.37
TRIM13-201ENST00000356017 STBD1O95210 358 aa17.37■□□□□ 0.37
TRIM13-201ENST00000356017 LRRC26Q2I0M4 334 aa17.37■□□□□ 0.37
TRIM13-201ENST00000356017 EXOC8Q8IYI6 725 aa17.37■□□□□ 0.37
TRIM13-201ENST00000356017 SYMPKQ92797 1274 aaKnown RBP17.37■□□□□ 0.37
TRIM13-201ENST00000356017 EPSTI1Q96J88 318 aa17.37■□□□□ 0.37
TRIM13-201ENST00000356017 CCDC43Q96MW1 224 aaKnown RBP17.37■□□□□ 0.37
TRIM13-201ENST00000356017 DDX19AQ9NUU7 478 aaKnown RBP17.37■□□□□ 0.37
TRIM13-201ENST00000356017 DNM3Q9UQ16 869 aa17.37■□□□□ 0.37
TRIM13-201ENST00000356017 NOD1Q9Y239 953 aa17.37■□□□□ 0.37
TRIM13-201ENST00000356017 RTP1P59025 263 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
TRIM13-201ENST00000356017 PTGISQ16647 500 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 TRIM60Q495X7 471 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 SPECC1Q5M775 1068 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 POTEGQ6S5H5 508 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 FAM126BQ8IXS8 530 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 LMBR1Q8WVP7 490 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 GDPD2Q9HCC8 539 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 FAM13BQ9NYF5 915 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 DBR1Q9UK59 544 aaKnown RBP17.36■□□□□ 0.37
TRIM13-201ENST00000356017 ATP11BQ9Y2G3 1177 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 MAGEB2O15479 319 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 B4GALT4O60513 344 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 PQBP1O60828 265 aaKnown RBP17.36■□□□□ 0.37
TRIM13-201ENST00000356017 IGBP1P78318 339 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 ADAM17P78536 824 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 TLE2Q04725 743 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 ECM1Q16610 540 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 GDF6Q6KF10 455 aaPredicted RBP17.36■□□□□ 0.37
TRIM13-201ENST00000356017 CLEC17AQ6ZS10 378 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 CEP170P1Q96L14 293 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 CYP26B1Q9NR63 512 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 TUBE1Q9UJT0 475 aa17.36■□□□□ 0.37
TRIM13-201ENST00000356017 MBLAC1A4D2B0 266 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms