RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 VHLP40337 213 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 CHRNA2Q15822 529 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 WASHC2DQ5SRD0 308 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 SPATA31D4Q6ZUB0 917 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 MIS12Q9H081 205 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 ARHGAP20Q9P2F6 1191 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
RTN3-205ENST00000356000 NHSQ6T4R5 1651 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 UTYO14607 1347 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 ASLP04424 464 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 RASA1P20936 1047 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.33
RTN3-205ENST00000356000 OCRLQ01968 901 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 FIGNQ5HY92 759 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 AGGF1Q8N302 714 aaeCLIP17.08■□□□□ 0.33
RTN3-205ENST00000356000 FAM13CQ8NE31 585 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 EPSTI1Q96J88 318 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 FAM81BQ96LP2 452 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 LRMDAQ9H2I8 198 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 PLAGL2Q9UPG8 496 aa17.08■□□□□ 0.33
RTN3-205ENST00000356000 R3HDM1Q15032 1099 aaKnown RBP17.08■□□□□ 0.32
RTN3-205ENST00000356000 SPON1Q9HCB6 807 aa17.08■□□□□ 0.32
RTN3-205ENST00000356000 EXOC1Q9NV70 894 aa17.08■□□□□ 0.32
RTN3-205ENST00000356000 PRKAG3Q9UGI9 489 aa17.08■□□□□ 0.32
RTN3-205ENST00000356000 INTUQ9ULD6 942 aa17.08■□□□□ 0.32
RTN3-205ENST00000356000 MAST3O60307 1309 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 KLK7P49862 253 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 ZNF658Q5TYW1 1059 aaPredicted RBP17.07■□□□□ 0.32
RTN3-205ENST00000356000 LRRC43Q8N309 656 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 RMDN2Q96LZ7 410 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 DPH5Q9H2P9 285 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 STOML1Q9UBI4 398 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 LNPEPQ9UIQ6 1025 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 TNS2Q63HR2 1409 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
RTN3-205ENST00000356000 ZPR1O75312 459 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 LMNAP02545 664 aaKnown RBP17.07■□□□□ 0.32
RTN3-205ENST00000356000 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
RTN3-205ENST00000356000 ITGA2BP08514 1039 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 FUT4P22083 530 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 MAGEA1P43355 309 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 DHX9Q08211 1270 aaKnown RBP17.07■□□□□ 0.32
RTN3-205ENST00000356000 PRPF4BQ13523 1007 aaKnown RBP17.07■□□□□ 0.32
RTN3-205ENST00000356000 DDB1Q16531 1140 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 P3H1Q32P28 736 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 TYW1BQ6NUM6 668 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 ZNF554Q86TJ5 538 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 PPP2R3CQ969Q6 453 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 LENG1Q96BZ8 264 aaPredicted RBP17.07■□□□□ 0.32
RTN3-205ENST00000356000 TXLNGQ9NUQ3 528 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 ETNK2Q9NVF9 386 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 CHMP2BQ9UQN3 213 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 NUB1Q9Y5A7 615 aa17.07■□□□□ 0.32
RTN3-205ENST00000356000 QSER1Q2KHR3 1735 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 OXCT1P55809 520 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 NLRP6P59044 892 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 RNASELQ05823 741 aaKnown RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 NTRK3Q16288 839 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 WDR60Q8WVS4 1066 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 TMEM237Q96Q45 408 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 DCLRE1BQ9H816 532 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 RPL26L1Q9UNX3 145 aaKnown RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 GRM8O00222 908 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 BUB1O43683 1085 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 ECE2O60344 883 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 MMP1P03956 469 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 ALOX15P16050 662 aaPredicted RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 EIF4A3P38919 411 aaKnown RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 CCNFP41002 786 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 KPNB1Q14974 876 aaKnown RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 ZC2HC1CQ53FD0 456 aaPredicted RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 CLMNQ96JQ2 1002 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.32
RTN3-205ENST00000356000 LARSQ9P2J5 1176 aaKnown RBP17.06■□□□□ 0.32
RTN3-205ENST00000356000 USP20Q9Y2K6 914 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
RTN3-205ENST00000356000 XDHP47989 1333 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 A0A0J9YVX5 310 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 KCNQ2O43526 872 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 HNRNPCP07910 306 aaKnown RBP eCLIP17.05■□□□□ 0.323e-6■■■□□ 17
RTN3-205ENST00000356000 HOXB7P09629 217 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 IFNAR2P48551 515 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 GSTA3Q16772 222 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 CWF19L2Q2TBE0 894 aaKnown RBP17.05■□□□□ 0.32
RTN3-205ENST00000356000 DAB2IPQ5VWQ8 1189 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 SLC15A3Q8IY34 581 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 DIS3L2Q8IYB7 885 aaKnown RBP17.05■□□□□ 0.32
RTN3-205ENST00000356000 ANKRD13CQ8N6S4 541 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
RTN3-205ENST00000356000 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 TXLNGYQ9BZA5 131 aa17.05■□□□□ 0.32
RTN3-205ENST00000356000 FOXP1Q9H334 677 aaPredicted RBP17.05■□□□□ 0.32
RTN3-205ENST00000356000 FGFR1OP2Q9NVK5 253 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms