RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 C19orf81C9J6K1 198 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 ADAMTS4O75173 837 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 CNMDO75829 334 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 FAM13AO94988 1023 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 IGHA2P01877 340 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 ASNSP08243 561 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 ITGB8P26012 769 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 CYP2C19P33261 490 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 CCNA1P78396 465 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 RASGRF1Q13972 1273 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 GRB14Q14449 540 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 KRT32Q14532 448 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 MCMDC2Q4G0Z9 681 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 PEAR1Q5VY43 1037 aaPredicted RBP8.18□□□□□ -1.1
VPS13A-201ENST00000355766 ARRDC4Q8NCT1 418 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 PPM1EQ8WY54 764 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 MAP4K1Q92918 833 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 TIFAQ96CG3 184 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 NEUROD6Q96NK8 337 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 DSCC1Q9BVC3 393 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 BHLHE41Q9C0J9 482 aaPredicted RBP8.18□□□□□ -1.1
VPS13A-201ENST00000355766 HIF3AQ9Y2N7 669 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 RABGAP1Q9Y3P9 1069 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 RLFQ13129 1914 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 ZMYM6O95789 1325 aa8.18□□□□□ -1.1
VPS13A-201ENST00000355766 MAP4K4O95819 1239 aaPredicted RBP8.17□□□□□ -1.1
VPS13A-201ENST00000355766 DLGAP3O95886 979 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 CLTBP09497 229 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 SPINK2P20155 84 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 GRIK1P39086 918 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 USP5P45974 858 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 TIMM10P62072 90 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 ATP2B2Q01814 1243 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 FPGSQ05932 587 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 EHHADHQ08426 723 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 UBE3CQ15386 1083 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 WDR78Q5VTH9 848 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 CWC27Q6UX04 472 aaKnown RBP8.17□□□□□ -1.1
VPS13A-201ENST00000355766 KRTAP1-3Q8IUG1 177 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 NPLOC4Q8TAT6 608 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 ASAP3Q8TDY4 903 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 ZNF384Q8TF68 577 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 ABCF2Q9UG63 623 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 TACC3Q9Y6A5 838 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 OAS3Q9Y6K5 1087 aaKnown RBP8.17□□□□□ -1.1
VPS13A-201ENST00000355766 SIPA1L1O43166 1804 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 MYH7P12883 1935 aa8.17□□□□□ -1.1
VPS13A-201ENST00000355766 GOLIM4O00461 696 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 KIAA0355O15063 1070 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 RNF113AO15541 343 aaKnown RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 SEPT4O43236 478 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 GAS2O43903 313 aaKnown RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 MAP4P27816 1152 aaKnown RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 PSMA5P28066 241 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 ADCYAP1R1P41586 468 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 NT5C2P49902 561 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 JAG1P78504 1218 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 MECOMQ03112 1051 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 TLE2Q04725 743 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 NMIQ13287 307 aaPredicted RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 LRRC41Q15345 812 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 ANO1Q5XXA6 986 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 OLFML2BQ68BL8 750 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 SPTY2D1Q68D10 685 aaPredicted RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 C12orf50Q8NA57 414 aaPredicted RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 SPATA5Q8NB90 893 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 APPBP2Q92624 585 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 C12orf42Q96LP6 360 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 DNAJC2Q99543 621 aaKnown RBP8.16□□□□□ -1.1
VPS13A-201ENST00000355766 TMPRSS13Q9BYE2 586 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 PRDM12Q9H4Q4 367 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 DNAJC18Q9H819 358 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 GINM1Q9NU53 330 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 MYH2Q9UKX2 1941 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 IVNS1ABPQ9Y6Y0 642 aa8.16□□□□□ -1.1
VPS13A-201ENST00000355766 A0A0D9SFI3 127 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 LOC100289279A0A1B0GTE1 492 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 PDIA4P13667 645 aaKnown RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 RAG1P15918 1043 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 ADORA1P30542 326 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 MCAMP43121 646 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 GP2P55259 537 aaKnown RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 NECTIN1Q15223 517 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 SGO2Q562F6 1265 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 FAM47AQ5JRC9 791 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 LBX2Q6XYB7 198 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 DTX1Q86Y01 620 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 CERS3Q8IU89 383 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 GJD3Q8N144 294 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 SMG8Q8ND04 991 aaKnown RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 FERMT2Q96AC1 680 aa8.15□□□□□ -1.1
VPS13A-201ENST00000355766 INTS4Q96HW7 963 aaKnown RBP8.15□□□□□ -1.1
VPS13A-201ENST00000355766 LRFN3Q9BTN0 628 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms