RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 C4orf22Q6V702 233 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 DCLRE1BQ9H816 532 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 MED14O60244 1454 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TUBA3CQ13748 450 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 LRWD1Q9UFC0 647 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 ITIH6Q6UXX5 1313 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 PFKFB1P16118 471 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 PTPREP23469 700 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 ALDH8A1Q9H2A2 487 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 KCND2Q9NZV8 630 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 PTCH1Q13635 1447 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 KLHL2O95198 593 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 CALB1P05937 261 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 OSCARQ8IYS5 282 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 BEST2Q8NFU1 509 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 CCDC126Q96EE4 140 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 ROPN1BQ9BZX4 212 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 ROPN1Q9HAT0 212 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 TBXAS1P24557 533 aaPredicted RBP8.59□□□□□ -1.03
HTT-201ENST00000355072 HPS3Q969F9 1004 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 VPS16Q9H269 839 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 TRPC7Q9HCX4 862 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 SNX14Q9Y5W7 946 aa8.59□□□□□ -1.03
HTT-201ENST00000355072 MROH2AA6NES4 1674 aa8.59□□□□□ -1.04
HTT-201ENST00000355072 FOSP01100 380 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 CIITAP33076 1130 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 ABCE1P61221 599 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 DCAF5Q96JK2 942 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 PARD6BQ9BYG5 372 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 SLC13A4Q9UKG4 626 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TRAF3IP3Q9Y228 551 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 CPP00450 1065 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 POLR2EP19388 210 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 HSP90AA4PQ58FG1 418 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 PLEKHM3Q6ZWE6 761 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 NUDCD3Q8IVD9 361 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 VPS9D1Q9Y2B5 631 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 ZBTB12Q9Y330 459 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 PRDM1O75626 825 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TNNC2P02585 160 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 PSMD6Q15008 389 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TRAPPC9Q96Q05 1148 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 NDEL1Q9GZM8 345 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TMX1Q9H3N1 280 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 SLC5A4Q9NY91 659 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 LRRC7Q96NW7 1537 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 BAZ2BQ9UIF8 2168 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 ABCB11O95342 1321 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 STK36Q9NRP7 1315 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 PSMC2P35998 433 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 RNF169Q8NCN4 708 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 ABCB1P08183 1280 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 ADKP55263 362 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 MFSD4BQ5TF39 518 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 SAMD1Q6SPF0 538 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 UTP6Q9NYH9 597 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 CTNNAL1Q9UBT7 734 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 VWA5AO00534 786 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TM9SF1O15321 606 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 SERPINB8P50452 374 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 PCYOX1LQ8NBM8 494 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 PAPOLBQ9NRJ5 636 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 NFU1Q9UMS0 254 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 CLTCL1P53675 1640 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 KIAA0391O15091 583 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 PKN2Q16513 984 aaKnown RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 ACRBPQ8NEB7 543 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 SLF1Q9BQI6 1058 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 MLPHQ9BV36 600 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 CYTH3O43739 400 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 NAA20P61599 178 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TNFAIP1Q13829 316 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 RGL1Q9NZL6 768 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 MAGEA13PA6NCF6 341 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 LZTS3O60299 673 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 MARK3P27448 753 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 SLC1A1P43005 524 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 VPS41P49754 854 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 ATP8B4Q8TF62 1192 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TMEM63CQ9P1W3 806 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 P3H1Q32P28 736 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 FAM207AQ9NSI2 230 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 USP15Q9Y4E8 981 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 BAG2O95816 211 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 VHLP40337 213 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 TUFT1Q9NNX1 390 aa8.58□□□□□ -1.04
HTT-201ENST00000355072 PRG3Q9Y2Y8 225 aaPredicted RBP8.58□□□□□ -1.04
HTT-201ENST00000355072 LSM1O15116 133 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 CBFA2T3O75081 653 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 BEND6Q5SZJ8 279 aaPredicted RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 MRPL50Q8N5N7 158 aaKnown RBP8.57□□□□□ -1.04
HTT-201ENST00000355072 TRPC4APQ8TEL6 797 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.57□□□□□ -1.04
HTT-201ENST00000355072 VPS33BQ9H267 617 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 ETNK1Q9HBU6 452 aa8.57□□□□□ -1.04
HTT-201ENST00000355072 CDY2AQ9Y6F7 541 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms