RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ZNF277Q9NRM2 450 aaPredicted RBP24.46■■□□□ 1.51
NKX2-1-201ENST00000354822 RNF14Q9UBS8 474 aa24.46■■□□□ 1.51
NKX2-1-201ENST00000354822 EIF3DO15371 548 aaKnown RBP eCLIP24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 PSMD10O75832 226 aa24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 PRPF6O94906 941 aaKnown RBP24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 MYBP10242 640 aa24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 KLHL30Q0D2K2 578 aa24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 RAPGEF1Q13905 1077 aa24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 RUSC1Q9BVN2 902 aa24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 RGL1Q9NZL6 768 aa24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 KIF13BQ9NQT8 1826 aa24.45■■□□□ 1.5
NKX2-1-201ENST00000354822 SLITRK3O94933 977 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 EPB41P11171 864 aaKnown RBP24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 VCPKMTQ9H867 229 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 GCNT3O95395 438 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 NR3C1P04150 777 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 PAFAH1B1P43034 410 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 NAB2Q15742 525 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 SPDYE2Q495Y8 402 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 KIAA1755Q5JYT7 1200 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 TBC1D5Q92609 795 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 WDR18Q9BV38 432 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 SUGCTQ9HAC7 445 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 FBXL5Q9UKA1 691 aa24.44■■□□□ 1.5
NKX2-1-201ENST00000354822 COL4A5P29400 1685 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 CLRN2A0PK11 232 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 TAL1P17542 331 aaPredicted RBP24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 NFIL3Q16649 462 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 EXOC3L4Q17RC7 722 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 HSP90B2PQ58FF3 399 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 WDR11Q9BZH6 1224 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 KCND2Q9NZV8 630 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 SEL1LQ9UBV2 794 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 SALL4Q9UJQ4 1053 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 H3BQF6 201 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 FAM13AO94988 1023 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 PRELPP51888 382 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 NAP1L1P55209 391 aaKnown RBP24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 CEP55Q53EZ4 464 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 CCDC181Q5TID7 509 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 CCDC174Q6PII3 467 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 TPH2Q8IWU9 490 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 DRC1Q96MC2 740 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 FEM1BQ9UK73 627 aa24.43■■□□□ 1.5
NKX2-1-201ENST00000354822 CCDC66A2RUB6 948 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 RSPH10B2B2RC85 870 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 RSPH10BP0C881 870 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 SETQ01105 290 aaPredicted RBP24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 KLHDC7AQ5VTJ3 777 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 CCNI2Q6ZMN8 369 aaPredicted RBP24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 C1orf186Q6ZWK4 172 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 SPATA4Q8NEY3 305 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 COG1Q8WTW3 980 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 EXOC4Q96A65 974 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 NACC1Q96RE7 527 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 MED4Q9NPJ6 270 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 PSD3Q9NYI0 1048 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 GTPBP10A4D1E9 387 aaKnown RBP24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 GAS7O60861 476 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 AKAP3O75969 853 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 ANXA13P27216 316 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 CTTNQ14247 550 aaKnown RBP24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 STXBP4Q6ZWJ1 553 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 ANKRD13CQ8N6S4 541 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 FAM133AQ8N9E0 248 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 SPAG5Q96R06 1193 aa24.42■■□□□ 1.5
NKX2-1-201ENST00000354822 ASTN1O14525 1302 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 CNTNAP1P78357 1384 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 UCHL3P15374 230 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 C2orf54Q08AI8 447 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 DPY19L2P1Q6NXN4 242 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 GBP6Q6ZN66 633 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 FAM83AQ86UY5 434 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 DYDC2Q96IM9 177 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 TLR10Q9BXR5 811 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 DEFB129Q9H1M3 183 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 PARVGQ9HBI0 331 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 RNF216Q9NWF9 866 aaPredicted RBP24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 ZNRF3Q9ULT6 936 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 MYH10P35580 1976 aa24.41■■□□□ 1.5
NKX2-1-201ENST00000354822 BTNL10A8MVZ5 291 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 PPP1R12BO60237 982 aaPredicted RBP24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 PON1P27169 355 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 NFRKBQ6P4R8 1299 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 NIM1KQ8IY84 436 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 MYCT1Q8N699 235 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 MTMR14Q8NCE2 650 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 FAM71BQ8TC56 605 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 PIGOQ8TEQ8 1089 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 ADAMTS1Q9UHI8 967 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 ADAM21Q9UKJ8 722 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 UBE4BO95155 1302 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 BUB1O43683 1085 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 SLC9A1P19634 815 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 EPHA7Q15375 998 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 IRF2BP2Q7Z5L9 587 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 GPIHBP1Q8IV16 184 aa24.4■■□□□ 1.5
NKX2-1-201ENST00000354822 ZBTB12Q9Y330 459 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms