RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 DNM3Q9UQ16 869 aa18.24■□□□□ 0.51
PDAP1-201ENST00000350498 FRMD3A2A2Y4 597 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 USO1O60763 962 aaKnown RBP18.23■□□□□ 0.51
PDAP1-201ENST00000350498 LCA5LO95447 670 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 RPA1P27694 616 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 COG2Q14746 738 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 TRADDQ15628 312 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 HAUS3Q68CZ6 603 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 TPH2Q8IWU9 490 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 SYT2Q8N9I0 419 aaPredicted RBP18.23■□□□□ 0.51
PDAP1-201ENST00000350498 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 ARL8AQ96BM9 186 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 GMCL1Q96IK5 515 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 PKD2L1Q9P0L9 805 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 RPS6KA5O75582 802 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 FTCDO95954 541 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 KLRC1P26715 233 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 NMT1P30419 496 aaKnown RBP18.23■□□□□ 0.51
PDAP1-201ENST00000350498 AP3B2Q13367 1082 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 Q4G0T1 1027 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 DCAF17Q5H9S7 520 aaPredicted RBP18.23■□□□□ 0.51
PDAP1-201ENST00000350498 SFMBT2Q5VUG0 894 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 RPGRIP1Q96KN7 1286 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 FAM184BQ9ULE4 1060 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 C10orf71Q711Q0 1435 aa18.23■□□□□ 0.51
PDAP1-201ENST00000350498 IGLV3-22A0A075B6J6 115 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 GOLGA6CA6NDK9 693 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 GOLGA6DP0CG33 693 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 KLHDC7AQ5VTJ3 777 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 DPY19L2P1Q6NXN4 242 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 TRMT1LQ7Z2T5 733 aaKnown RBP18.22■□□□□ 0.51
PDAP1-201ENST00000350498 TMEM39BQ9GZU3 492 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 GOLGA6AQ9NYA3 693 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 CCDC181Q5TID7 509 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 DYDC2Q96IM9 177 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 GANQ9H2C0 597 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 CEP72Q9P209 647 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 ABCB11O95342 1321 aa18.22■□□□□ 0.51
PDAP1-201ENST00000350498 SHTN1A0MZ66 631 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 GCNT3O95395 438 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 MCM3P25205 808 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 TCERG1LQ5VWI1 586 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 KCTD16Q68DU8 428 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 MMGT1Q8N4V1 131 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 SH2D3CQ8N5H7 860 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 PROCA1Q8NCQ7 364 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-201ENST00000350498 SH2D3AQ9BRG2 576 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 MRIQ9BWK5 157 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 TSGA10Q9BZW7 698 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 PCDHB13Q9Y5F0 798 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 GLI1P08151 1106 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 FAM153BP0C7A2 387 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 KNOP1Q1ED39 458 aaKnown RBP18.21■□□□□ 0.51
PDAP1-201ENST00000350498 FAM153CQ494X1 144 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 RBM46Q8TBY0 533 aaKnown RBP18.21■□□□□ 0.51
PDAP1-201ENST00000350498 ZNF277Q9NRM2 450 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-201ENST00000350498 FAM153AQ9UHL3 310 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 ASTN1O14525 1302 aa18.21■□□□□ 0.51
PDAP1-201ENST00000350498 DDX39AO00148 427 aaKnown RBP18.2■□□□□ 0.5
PDAP1-201ENST00000350498 CETN3O15182 167 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 SLITRK3O94933 977 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 ARP10275 920 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 HDLBPQ00341 1268 aaKnown RBP18.2■□□□□ 0.5
PDAP1-201ENST00000350498 FAM76AQ8TAV0 307 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 CEP63Q96MT8 703 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 PALMO75781 387 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 KRT14P02533 472 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 CCT5P48643 541 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 CARSP49589 748 aaKnown RBP18.2■□□□□ 0.5
PDAP1-201ENST00000350498 STAT2P52630 851 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 SLC9C1Q4G0N8 1177 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 TTMPQ5BVD1 217 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 CC2D2BQ6DHV5 1058 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 STYK1Q6J9G0 422 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 RINT1Q6NUQ1 792 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 MAEAQ7L5Y9 396 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 EPM2AIP1Q7L775 607 aaPredicted RBP18.2■□□□□ 0.5
PDAP1-201ENST00000350498 HYOU1Q9Y4L1 999 aa18.2■□□□□ 0.5
PDAP1-201ENST00000350498 EPS15P42566 896 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 MMP14P50281 582 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 IRAK1P51617 712 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 PTK2Q05397 1052 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 PLS1Q14651 629 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 PACS2Q86VP3 889 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 RABGAP1Q9Y3P9 1069 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 PPFIA4O75335 1185 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 SLC20A2Q08357 652 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 KLHL30Q0D2K2 578 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 OTOP1Q7RTM1 612 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 ZNF571Q7Z3V5 609 aaPredicted RBP18.19■□□□□ 0.5
PDAP1-201ENST00000350498 IFT81Q8WYA0 676 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 STIM2Q9P246 746 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 NFU1Q9UMS0 254 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 COL4A5P29400 1685 aa18.19■□□□□ 0.5
PDAP1-201ENST00000350498 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
PDAP1-201ENST00000350498 TGFB1I1O43294 461 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms