RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PDXKO00764 312 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 SLC16A3O15427 465 aaKnown RBP13.24□□□□□ -0.29
SMAD9-201ENST00000350148 FCER1AP12319 257 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 POLR2BP30876 1174 aaKnown RBP13.24□□□□□ -0.29
SMAD9-201ENST00000350148 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 RSRC1Q96IZ7 334 aaKnown RBP13.24□□□□□ -0.29
SMAD9-201ENST00000350148 TMEM39BQ9GZU3 492 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 E9PMD0 336 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 RHBDL3P58872 404 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 PTK2Q05397 1052 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 C8orf74Q6P047 294 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 ANKRD36BP1Q96IX9 119 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 MMP19Q99542 508 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 CEP72Q9P209 647 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 HMGCS2P54868 508 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 SNAPC2Q13487 334 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 IQCB1Q15051 598 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 PKN1Q16512 942 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 MAATS1Q7Z4T9 603 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 SFR1Q86XK3 245 aa13.24□□□□□ -0.29
SMAD9-201ENST00000350148 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
SMAD9-201ENST00000350148 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 MXRA8Q9BRK3 442 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 BEGAINQ9BUH8 593 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 ZNF302Q9NR11 478 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 ARFGEF2Q9Y6D5 1785 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 MTERF2Q49AM1 385 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 ADSSL1Q8N142 457 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 CARD6Q9BX69 1037 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 TBC1D12O60347 775 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 FRMD5Q7Z6J6 570 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 LXNQ9BS40 222 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 LCMT1Q9UIC8 334 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 ITIH6Q6UXX5 1313 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 NR3C1P04150 777 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 RPA1P27694 616 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 TNFAIP2Q03169 654 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 KYAT1Q16773 422 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 TAX1BP1Q86VP1 789 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.23□□□□□ -0.29
SMAD9-201ENST00000350148 GPRASP2Q96D09 838 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 IL17RBQ9NRM6 502 aa13.23□□□□□ -0.29
SMAD9-201ENST00000350148 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 PIK3CAP42336 1068 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 MXI1P50539 228 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 MAK16Q9BXY0 300 aaKnown RBP13.22□□□□□ -0.29
SMAD9-201ENST00000350148 ZNF233A6NK53 670 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 ANXA13P27216 316 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 SREBF1P36956 1147 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 BRD3Q15059 726 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 Q4G0T1 1027 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 ARFGAP2Q8N6H7 521 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 INO80BQ9C086 356 aaPredicted RBP13.22□□□□□ -0.29
SMAD9-201ENST00000350148 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 CFAP58Q5T655 872 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 XXYLT1Q8NBI6 393 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 KIAA1683Q9H0B3 1180 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 SLC9A2Q9UBY0 812 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 DDTLA6NHG4 134 aaPredicted RBP13.22□□□□□ -0.29
SMAD9-201ENST00000350148 K7ERI5 159 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 KRT19P08727 400 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 AP3M2P53677 418 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 EDRF1Q3B7T1 1238 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 GSTA5Q7RTV2 222 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 ST7Q9NRC1 585 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 PARP2Q9UGN5 583 aa13.22□□□□□ -0.29
SMAD9-201ENST00000350148 ARHGEF37A1IGU5 675 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 GNAT1P11488 350 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 OAZ1P54368 228 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 MAP2K1Q02750 393 aaPredicted RBP13.21□□□□□ -0.29
SMAD9-201ENST00000350148 PPM1KQ8N3J5 372 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 MTRQ99707 1265 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 UTP11Q9Y3A2 253 aaKnown RBP13.21□□□□□ -0.29
SMAD9-201ENST00000350148 A6NNZ2 444 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 EIF3DO15371 548 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMAD9-201ENST00000350148 CD19P15391 556 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
SMAD9-201ENST00000350148 PPP1R7Q15435 360 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 TUBB8Q3ZCM7 444 aa13.21□□□□□ -0.29
SMAD9-201ENST00000350148 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.29
SMAD9-201ENST00000350148 POTEFA5A3E0 1075 aa13.21□□□□□ -0.3
SMAD9-201ENST00000350148 POTEIP0CG38 1075 aa13.21□□□□□ -0.3
SMAD9-201ENST00000350148 ATP2A2P16615 1042 aaKnown RBP13.21□□□□□ -0.3
SMAD9-201ENST00000350148 GBP1P32455 592 aa13.21□□□□□ -0.3
SMAD9-201ENST00000350148 POTEGQ6S5H5 508 aa13.21□□□□□ -0.3
SMAD9-201ENST00000350148 POTEEQ6S8J3 1075 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms