RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 SAMM50Q9Y512 469 aa24.93■■□□□ 1.58
SNX3-202ENST00000349379 ZBTB42B2RXF5 422 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 KIF28PB7ZC32 967 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 CHMP2AO43633 222 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 ZNF862O60290 1169 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 NBNO60934 754 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 FGBP02675 491 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 U2AF2P26368 475 aaKnown RBP eCLIP24.92■■□□□ 1.58
SNX3-202ENST00000349379 THPOP40225 353 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 MBTPS1Q14703 1052 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 RUFY4Q6ZNE9 571 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 MIER3Q7Z3K6 550 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 BBXQ8WY36 941 aaPredicted RBP24.92■■□□□ 1.58
SNX3-202ENST00000349379 LRCH3Q96II8 777 aa24.92■■□□□ 1.58
SNX3-202ENST00000349379 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.92■■□□□ 1.58
SNX3-202ENST00000349379 UGCGQ16739 394 aa24.91■■□□□ 1.58
SNX3-202ENST00000349379 FAM26DQ5JW98 314 aa24.91■■□□□ 1.58
SNX3-202ENST00000349379 DEFB128Q7Z7B8 93 aa24.91■■□□□ 1.58
SNX3-202ENST00000349379 NOSTRINQ8IVI9 506 aa24.91■■□□□ 1.58
SNX3-202ENST00000349379 TRAPPC12Q8WVT3 735 aa24.91■■□□□ 1.58
SNX3-202ENST00000349379 ARID2Q68CP9 1835 aa24.91■■□□□ 1.58
SNX3-202ENST00000349379 EML1O00423 815 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 IGBP1P78318 339 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 SPIRE1Q08AE8 756 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 ZNF484Q5JVG2 852 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 SLFN12Q8IYM2 578 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 FAM167AQ96KS9 214 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 SMC3Q9UQE7 1217 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 PCDHA2Q9Y5H9 948 aa24.9■■□□□ 1.58
SNX3-202ENST00000349379 RSPH10B2B2RC85 870 aa24.89■■□□□ 1.58
SNX3-202ENST00000349379 NEMFO60524 1076 aa24.89■■□□□ 1.58
SNX3-202ENST00000349379 RSPH10BP0C881 870 aa24.89■■□□□ 1.58
SNX3-202ENST00000349379 ORC2Q13416 577 aaPredicted RBP24.89■■□□□ 1.58
SNX3-202ENST00000349379 GPR153Q6NV75 609 aa24.89■■□□□ 1.58
SNX3-202ENST00000349379 OTOP2Q7RTS6 562 aa24.89■■□□□ 1.58
SNX3-202ENST00000349379 ZBTB10Q96DT7 871 aa24.89■■□□□ 1.58
SNX3-202ENST00000349379 MTMR9Q96QG7 549 aa24.89■■□□□ 1.58
SNX3-202ENST00000349379 CXXC1Q9P0U4 656 aaPredicted RBP24.89■■□□□ 1.58
SNX3-202ENST00000349379 SZT2Q5T011 3432 aa24.89■■□□□ 1.57
SNX3-202ENST00000349379 RPLP2P05387 115 aaKnown RBP24.88■■□□□ 1.57
SNX3-202ENST00000349379 TRAPPC10P48553 1259 aa24.88■■□□□ 1.57
SNX3-202ENST00000349379 MGAT3Q09327 533 aa24.88■■□□□ 1.57
SNX3-202ENST00000349379 CALCRLQ16602 461 aa24.88■■□□□ 1.57
SNX3-202ENST00000349379 MTHFD1LQ6UB35 978 aa24.88■■□□□ 1.57
SNX3-202ENST00000349379 MTIF3Q9H2K0 278 aaKnown RBP24.88■■□□□ 1.57
SNX3-202ENST00000349379 SMIM35A0A1B0GVV1 85 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 STBD1O95210 358 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 BAG4O95429 457 aaKnown RBP24.87■■□□□ 1.57
SNX3-202ENST00000349379 OATP04181 439 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 SMAD3P84022 425 aaKnown RBP24.87■■□□□ 1.57
SNX3-202ENST00000349379 PRKCEQ02156 737 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 CKAP2LQ8IYA6 745 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 DNAJB3Q8WWF6 145 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 SNX21Q969T3 373 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 TMEM60Q9H2L4 133 aa24.87■■□□□ 1.57
SNX3-202ENST00000349379 CHRNA1P02708 482 aa24.86■■□□□ 1.57
SNX3-202ENST00000349379 CTSHP09668 335 aa24.86■■□□□ 1.57
SNX3-202ENST00000349379 ACTN1P12814 892 aa24.86■■□□□ 1.57
SNX3-202ENST00000349379 KLRC1P26715 233 aa24.86■■□□□ 1.57
SNX3-202ENST00000349379 OSBPL7Q9BZF2 842 aa24.86■■□□□ 1.57
SNX3-202ENST00000349379 CEP131Q9UPN4 1083 aa24.86■■□□□ 1.57
SNX3-202ENST00000349379 LAMA2P24043 3122 aaKnown RBP24.86■■□□□ 1.57
SNX3-202ENST00000349379 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.85■■□□□ 1.57
SNX3-202ENST00000349379 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.85■■□□□ 1.57
SNX3-202ENST00000349379 MARCH6O60337 910 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 BAIAP3O94812 1187 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 C22orf31O95567 290 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 MCM7P33993 719 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 GNL2Q13823 731 aaKnown RBP24.85■■□□□ 1.57
SNX3-202ENST00000349379 EPHA7Q15375 998 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 TCTN1Q2MV58 587 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 TTC38Q5R3I4 469 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 CNKSR3Q6P9H4 555 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 RSPH3Q86UC2 560 aa24.85■■□□□ 1.57
SNX3-202ENST00000349379 FTOQ9C0B1 505 aaKnown RBP eCLIP24.85■■□□□ 1.57
SNX3-202ENST00000349379 K7ELQ4 463 aaPredicted RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 ATP2B1P20020 1258 aa24.84■■□□□ 1.57
SNX3-202ENST00000349379 TOB1P50616 345 aaPredicted RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 PSMC5P62195 406 aa24.84■■□□□ 1.57
SNX3-202ENST00000349379 TARBP2Q15633 366 aaKnown RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 PLEKHG4Q58EX7 1191 aa24.84■■□□□ 1.57
SNX3-202ENST00000349379 FAM109BQ6ICB4 259 aaPredicted RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 BANK1Q8NDB2 785 aa24.84■■□□□ 1.57
SNX3-202ENST00000349379 INTS4Q96HW7 963 aaKnown RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 NIFKQ9BYG3 293 aaKnown RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 TTC12Q9H892 705 aaPredicted RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 NRBP2Q9NSY0 501 aa24.84■■□□□ 1.57
SNX3-202ENST00000349379 NOL7Q9UMY1 257 aaKnown RBP24.84■■□□□ 1.57
SNX3-202ENST00000349379 PCDHA12Q9UN75 941 aa24.84■■□□□ 1.57
SNX3-202ENST00000349379 QARSP47897 775 aaKnown RBP24.83■■□□□ 1.57
SNX3-202ENST00000349379 MRPS6P82932 125 aaKnown RBP24.83■■□□□ 1.57
SNX3-202ENST00000349379 MKRN4PQ13434 485 aaPredicted RBP24.83■■□□□ 1.57
SNX3-202ENST00000349379 XKR3Q5GH77 459 aa24.83■■□□□ 1.57
SNX3-202ENST00000349379 NME8Q8N427 588 aa24.83■■□□□ 1.57
SNX3-202ENST00000349379 LINC01465Q8N7H1 131 aa24.83■■□□□ 1.57
SNX3-202ENST00000349379 CEP89Q96ST8 783 aa24.83■■□□□ 1.57
SNX3-202ENST00000349379 FAM49AQ9H0Q0 323 aaPredicted RBP24.83■■□□□ 1.57
SNX3-202ENST00000349379 RBAK-RBAKDNI3L0D1 243 aa24.82■■□□□ 1.56
SNX3-202ENST00000349379 P4HBP07237 508 aaKnown RBP24.82■■□□□ 1.56
SNX3-202ENST00000349379 ZNF174Q15697 407 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms