RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 INPP4AQ96PE3 977 aaPredicted RBP15.94■□□□□ 0.14
SMTN-202ENST00000347557 DHX36Q9H2U1 1008 aaKnown RBP15.94■□□□□ 0.14
SMTN-202ENST00000347557 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.94■□□□□ 0.142e-6■■■■■ 136.2
SMTN-202ENST00000347557 KDM3AQ9Y4C1 1321 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 KIF4AO95239 1232 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 SMARCA1P28370 1054 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 CTNNA1P35221 906 aaKnown RBP15.94■□□□□ 0.14
SMTN-202ENST00000347557 MAP2K1Q02750 393 aaPredicted RBP15.94■□□□□ 0.14
SMTN-202ENST00000347557 PLS1Q14651 629 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 CATSPER3Q86XQ3 398 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 REEP2Q9BRK0 252 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 BHMT2Q9H2M3 363 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 KCTD10Q9H3F6 313 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 DNM3Q9UQ16 869 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 AFPP02771 609 aaKnown RBP15.94■□□□□ 0.14
SMTN-202ENST00000347557 COPB2P35606 906 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 NFIAQ12857 509 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 PIGOQ8TEQ8 1089 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 KAT2BQ92831 832 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 CELF4Q9BZC1 486 aaKnown RBP15.94■□□□□ 0.14
SMTN-202ENST00000347557 GANQ9H2C0 597 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 RNF14Q9UBS8 474 aa15.94■□□□□ 0.14
SMTN-202ENST00000347557 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
SMTN-202ENST00000347557 hCG_1984214I3L0E3 225 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 ZFPM1Q8IX07 1006 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 ZNF713Q8N859 430 aaPredicted RBP15.93■□□□□ 0.14
SMTN-202ENST00000347557 RDH13Q8NBN7 331 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 GOPCQ9HD26 462 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 RBAK-RBAKDNI3L0D1 243 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 SART1O43290 800 aaKnown RBP15.93■□□□□ 0.14
SMTN-202ENST00000347557 DAPK3O43293 454 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 KIF1CO43896 1103 aaKnown RBP15.93■□□□□ 0.14
SMTN-202ENST00000347557 AKAP3O75969 853 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 SERPINB2P05120 415 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 MNAT1P51948 309 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 RC3H1Q5TC82 1133 aaKnown RBP15.93■□□□□ 0.14
SMTN-202ENST00000347557 PIK3R5Q8WYR1 880 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 RGL1Q9NZL6 768 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 GCNT4Q9P109 453 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 AJAP1Q9UKB5 411 aaPredicted RBP15.93■□□□□ 0.14
SMTN-202ENST00000347557 PCDHGC5Q9Y5F6 944 aa15.93■□□□□ 0.14
SMTN-202ENST00000347557 SMIM23A6NLE4 172 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 TMOD1P28289 359 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 NT5C2P49902 561 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 IFT88Q13099 833 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 METTL13Q8N6R0 699 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 CYP2W1Q8TAV3 490 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 ATP6V1G3Q96LB4 118 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 TAF1DQ9H5J8 278 aaPredicted RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 NAGPAQ9UK23 515 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 CCDC189A1A4V9 331 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 GCOM1H8Y6P7 765 aaPredicted RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 MYO1FO00160 1098 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 HLA-DOAP06340 250 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 MYZAPP0CAP1 466 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 PON1P27169 355 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 FLT3P36888 993 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 KNOP1Q1ED39 458 aaKnown RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 RBM46Q8TBY0 533 aaKnown RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 SYN2Q92777 582 aaPredicted RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 PLCD4Q9BRC7 762 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 AIPL1Q9NZN9 384 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 NOC2LQ9Y3T9 749 aaKnown RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 PCDHA2Q9Y5H9 948 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 PCDHAC2Q9Y5I4 1007 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 MYH1P12882 1939 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 IL1R1P14778 569 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 HSD17B3P37058 310 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 UBXN2AP68543 259 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 ARHGAP4P98171 946 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 HDLBPQ00341 1268 aaKnown RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 SEPT2Q15019 361 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 IRF2BP2Q7Z5L9 587 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 TBC1D22AQ8WUA7 517 aa15.92■□□□□ 0.14
SMTN-202ENST00000347557 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
SMTN-202ENST00000347557 TTI1O43156 1089 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 FLOT1O75955 427 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 H2AFZP0C0S5 128 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 EPB41P11171 864 aaKnown RBP15.91■□□□□ 0.14
SMTN-202ENST00000347557 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
SMTN-202ENST00000347557 GCFC2P16383 781 aaKnown RBP15.91■□□□□ 0.14
SMTN-202ENST00000347557 SHMT1P34896 483 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 GIT2Q14161 759 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 GPATCH4Q5T3I0 446 aaKnown RBP15.91■□□□□ 0.14
SMTN-202ENST00000347557 SLFN13Q68D06 897 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 H2AFVQ71UI9 128 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 SPICE1Q8N0Z3 855 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 WHAMMQ8TF30 809 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 FAM212AQ96EL1 285 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 ZC3H12CQ9C0D7 883 aaKnown RBP15.91■□□□□ 0.14
SMTN-202ENST00000347557 NEUROG2Q9H2A3 272 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 SPDYE3A6NKU9 549 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 GDF11O95390 407 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 CTTNQ14247 550 aaKnown RBP15.91■□□□□ 0.14
SMTN-202ENST00000347557 ARHGAP44Q17R89 818 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 B4GALNT4Q76KP1 1039 aa15.91■□□□□ 0.14
SMTN-202ENST00000347557 VPS36Q86VN1 386 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms