RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 TCF7P36402 384 aaPredicted RBP20.42■□□□□ 0.86
USF2-202ENST00000343550 SETQ01105 290 aaPredicted RBP20.42■□□□□ 0.86
USF2-202ENST00000343550 TFF2Q03403 129 aa20.42■□□□□ 0.86
USF2-202ENST00000343550 INF2Q27J81 1249 aa20.42■□□□□ 0.86
USF2-202ENST00000343550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.42■□□□□ 0.86
USF2-202ENST00000343550 TRIM50Q86XT4 487 aa20.42■□□□□ 0.86
USF2-202ENST00000343550 UIMC1Q96RL1 719 aa20.42■□□□□ 0.86
USF2-202ENST00000343550 ZNF215Q9UL58 517 aaPredicted RBP20.42■□□□□ 0.86
USF2-202ENST00000343550 PRRC2BQ5JSZ5 2229 aaKnown RBP20.41■□□□□ 0.86
USF2-202ENST00000343550 CCDC194A0A1B0GVG4 234 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 LPXNO60711 386 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 CAND2O75155 1236 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 FOSBP53539 338 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 NR5A1Q13285 461 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 TRIM29Q14134 588 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 AAK1Q2M2I8 961 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 PLEKHG4Q58EX7 1191 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 EARS2Q5JPH6 523 aaKnown RBP20.41■□□□□ 0.86
USF2-202ENST00000343550 UTP14CQ5TAP6 766 aaKnown RBP20.41■□□□□ 0.86
USF2-202ENST00000343550 FAM117BQ6P1L5 589 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 TNFRSF25Q93038 417 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 UHRF1Q96T88 793 aaPredicted RBP20.41■□□□□ 0.86
USF2-202ENST00000343550 ZNF577Q9BSK1 485 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 PTPRSQ13332 1948 aa20.41■□□□□ 0.86
USF2-202ENST00000343550 BTBD18B2RXH4 712 aa20.4■□□□□ 0.86
USF2-202ENST00000343550 MKRN4PQ13434 485 aaPredicted RBP20.4■□□□□ 0.86
USF2-202ENST00000343550 Q4G0T1 1027 aa20.4■□□□□ 0.86
USF2-202ENST00000343550 PIK3AP1Q6ZUJ8 805 aa20.4■□□□□ 0.86
USF2-202ENST00000343550 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
USF2-202ENST00000343550 TBC1D22BQ9NU19 505 aa20.4■□□□□ 0.86
USF2-202ENST00000343550 LINC01553A4QN01 128 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 ATG7O95352 703 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 AMHP03971 560 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 BMP1P13497 986 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 ACTR2P61160 394 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 ERVK-21P61565 698 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 MOXD1Q6UVY6 613 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 DIS3L2Q8IYB7 885 aaKnown RBP20.39■□□□□ 0.85
USF2-202ENST00000343550 FAM184AQ8NB25 1140 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 C8orf76Q96K31 380 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 MBOAT7Q96N66 472 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 TGS1Q96RS0 853 aaKnown RBP20.39■□□□□ 0.85
USF2-202ENST00000343550 MTUS1Q9ULD2 1270 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 INSL6Q9Y581 213 aa20.39■□□□□ 0.85
USF2-202ENST00000343550 MSH4O15457 936 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 TDP2O95551 362 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 CCNE2O96020 404 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 CTSHP09668 335 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 ADAM17P78536 824 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 GUCY1B3Q02153 619 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 MYOCDQ8IZQ8 938 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 FBXO18Q8NFZ0 1043 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 GDPD5Q8WTR4 605 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 LMBR1Q8WVP7 490 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 SEPT8Q92599 483 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 LMCD1Q9NZU5 365 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 COG5Q9UP83 839 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 NRCAMQ92823 1304 aa20.38■□□□□ 0.85
USF2-202ENST00000343550 DDX39AO00148 427 aaKnown RBP20.37■□□□□ 0.85
USF2-202ENST00000343550 LETM2Q2VYF4 491 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 NEK8Q86SG6 692 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 PCYT2Q99447 389 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 OSBPL7Q9BZF2 842 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 SMARCAD1Q9H4L7 1026 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 FAM205CA6NFA0 338 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 KCNQ1P51787 676 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 PPP4R3AQ6IN85 833 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 ABHD15Q6UXT9 468 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 GLG1Q92896 1179 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 SLC5A5Q92911 643 aa20.37■□□□□ 0.85
USF2-202ENST00000343550 IGKV6D-21A0A0A0MT36 114 aa20.36■□□□□ 0.85
USF2-202ENST00000343550 HTRA4P83105 476 aaPredicted RBP20.36■□□□□ 0.85
USF2-202ENST00000343550 SAFBQ15424 915 aaKnown RBP eCLIP20.36■□□□□ 0.85
USF2-202ENST00000343550 FAM26DQ5JW98 314 aa20.36■□□□□ 0.85
USF2-202ENST00000343550 HLA-CQ95604 372 aa20.36■□□□□ 0.85
USF2-202ENST00000343550 GJA10Q969M2 543 aa20.36■□□□□ 0.85
USF2-202ENST00000343550 RIT2Q99578 217 aa20.36■□□□□ 0.85
USF2-202ENST00000343550 ERAP1Q9NZ08 941 aa20.36■□□□□ 0.85
USF2-202ENST00000343550 DDX25Q9UHL0 483 aaKnown RBP20.36■□□□□ 0.85
USF2-202ENST00000343550 ZNF746Q6NUN9 644 aaPredicted RBP20.35■□□□□ 0.85
USF2-202ENST00000343550 PLPPR4Q7Z2D5 763 aa20.35■□□□□ 0.85
USF2-202ENST00000343550 TOP1MTQ969P6 601 aa20.35■□□□□ 0.85
USF2-202ENST00000343550 NECAB3Q96P71 396 aaPredicted RBP20.35■□□□□ 0.85
USF2-202ENST00000343550 SLC37A4O43826 429 aa20.34■□□□□ 0.85
USF2-202ENST00000343550 CCNT1O60563 726 aaKnown RBP20.34■□□□□ 0.85
USF2-202ENST00000343550 GCFC2P16383 781 aaKnown RBP20.34■□□□□ 0.85
USF2-202ENST00000343550 STAT5BP51692 787 aa20.34■□□□□ 0.85
USF2-202ENST00000343550 KRT76Q01546 638 aa20.34■□□□□ 0.85
USF2-202ENST00000343550 ETNPPLQ8TBG4 499 aa20.34■□□□□ 0.85
USF2-202ENST00000343550 SP7Q8TDD2 431 aaPredicted RBP20.34■□□□□ 0.85
USF2-202ENST00000343550 NAP1L4Q99733 375 aaKnown RBP20.34■□□□□ 0.85
USF2-202ENST00000343550 AZI2Q9H6S1 392 aa20.34■□□□□ 0.85
USF2-202ENST00000343550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.33■□□□□ 0.85
USF2-202ENST00000343550 PSMD10O75832 226 aa20.33■□□□□ 0.85
USF2-202ENST00000343550 CHRNA1P02708 482 aa20.33■□□□□ 0.85
USF2-202ENST00000343550 MARK3P27448 753 aa20.33■□□□□ 0.85
USF2-202ENST00000343550 LRCH2Q5VUJ6 765 aa20.33■□□□□ 0.85
USF2-202ENST00000343550 TAF2Q6P1X5 1199 aa20.33■□□□□ 0.85
USF2-202ENST00000343550 RPAINQ86UA6 219 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms