RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 RASSF10A6NK89 507 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 RGS20O76081 388 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 GCNT3O95395 438 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 KRT9P35527 623 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 IRX3P78415 501 aaPredicted RBP22.09■■□□□ 1.13
RTN1-202ENST00000342503 MTF1Q14872 753 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 KNOP1Q1ED39 458 aaKnown RBP22.09■■□□□ 1.13
RTN1-202ENST00000342503 EDRF1Q3B7T1 1238 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 CCDC40Q4G0X9 1142 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 RIOX2Q8IUF8 465 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 ERGIC2Q96RQ1 377 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 PARVGQ9HBI0 331 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 DBR1Q9UK59 544 aaKnown RBP22.09■■□□□ 1.13
RTN1-202ENST00000342503 ODF2LQ9ULJ1 636 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 PPP2R2CQ9Y2T4 447 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 IQCA1LA6NCM1 817 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 MAFGO15525 162 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 ZSCAN12O43309 604 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 LYPLA2O95372 231 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 GUCY2CP25092 1073 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 ZNF131P52739 623 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 UGCGQ16739 394 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 PADI6Q6TGC4 694 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 RAD9BQ6WBX8 426 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 ARMC9Q7Z3E5 817 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 REXO1L1PQ8IX06 675 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 OPTNQ96CV9 577 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 NUP58Q9BVL2 599 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 TCEAL9Q9UHQ7 104 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 CAPN11Q9UMQ6 739 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 TRAF3IP3Q9Y228 551 aa22.09■■□□□ 1.13
RTN1-202ENST00000342503 WDR64B1ANS9 1081 aa22.08■■□□□ 1.12
RTN1-202ENST00000342503 GNA14O95837 355 aa22.08■■□□□ 1.12
RTN1-202ENST00000342503 NMT1P30419 496 aaKnown RBP22.08■■□□□ 1.12
RTN1-202ENST00000342503 SFNP31947 248 aa22.08■■□□□ 1.12
RTN1-202ENST00000342503 ADAM9Q13443 819 aa22.08■■□□□ 1.12
RTN1-202ENST00000342503 ANKRD35Q8N283 1001 aa22.08■■□□□ 1.12
RTN1-202ENST00000342503 PCMTD1Q96MG8 357 aaPredicted RBP22.08■■□□□ 1.12
RTN1-202ENST00000342503 ASCC2Q9H1I8 757 aaPredicted RBP22.08■■□□□ 1.12
RTN1-202ENST00000342503 PDXKO00764 312 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 CALUO43852 315 aaPredicted RBP22.07■■□□□ 1.12
RTN1-202ENST00000342503 STAM2O75886 525 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 KCNA2P16389 499 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 ERCC3P19447 782 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 ZNF746Q6NUN9 644 aaPredicted RBP22.07■■□□□ 1.12
RTN1-202ENST00000342503 SENP7Q9BQF6 1050 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 TTYH3Q9C0H2 523 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 SPATC1LQ9H0A9 340 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 SEL1LQ9UBV2 794 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 FBXO40Q9UH90 709 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 AGTPBP1Q9UPW5 1226 aa22.07■■□□□ 1.12
RTN1-202ENST00000342503 LUC7L2Q9Y383 392 aaKnown RBP22.07■■□□□ 1.12
RTN1-202ENST00000342503 CETN3O15182 167 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 EIF3DO15371 548 aaKnown RBP eCLIP22.06■■□□□ 1.12
RTN1-202ENST00000342503 HIP1RO75146 1068 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 CNMDO75829 334 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 MARSP56192 900 aaKnown RBP22.06■■□□□ 1.12
RTN1-202ENST00000342503 PSMC5P62195 406 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 CNTN2Q02246 1040 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 MAPK8IP2Q13387 824 aaPredicted RBP22.06■■□□□ 1.12
RTN1-202ENST00000342503 MOGSQ13724 837 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 C4orf19Q8IY42 314 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 RETREG2Q8NC44 543 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 ZNF592Q92610 1267 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 FIZ1Q96SL8 496 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 IWS1Q96ST2 819 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 DESI2Q9BSY9 194 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 PAGR1Q9BTK6 254 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 MOV10L1Q9BXT6 1211 aaKnown RBP22.06■■□□□ 1.12
RTN1-202ENST00000342503 TYW1Q9NV66 732 aaKnown RBP22.06■■□□□ 1.12
RTN1-202ENST00000342503 PFASO15067 1338 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 KIF2AO00139 706 aaPredicted RBP22.06■■□□□ 1.12
RTN1-202ENST00000342503 GRIN3BO60391 1043 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 NR2F2P24468 414 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 YWHABP31946 246 aaKnown RBP22.06■■□□□ 1.12
RTN1-202ENST00000342503 RARRES1P49788 294 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 HERVK_113P62684 666 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 ERVK-24P63145 666 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 MAPK7Q13164 816 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 NCAPG2Q86XI2 1143 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 TMTC1Q8IUR5 882 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 DNERQ8NFT8 737 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 RDM1Q8NG50 284 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 ASTN1O14525 1302 aa22.06■■□□□ 1.12
RTN1-202ENST00000342503 NFASCO94856 1347 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 SPATA31C2B4DYI2 1134 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 TRIM21P19474 475 aaKnown RBP22.05■■□□□ 1.12
RTN1-202ENST00000342503 KCNA1Q09470 495 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 ZC2HC1CQ53FD0 456 aaPredicted RBP22.05■■□□□ 1.12
RTN1-202ENST00000342503 PNMA8AQ86V59 439 aaPredicted RBP22.05■■□□□ 1.12
RTN1-202ENST00000342503 DAW1Q8N136 415 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 OR8K1Q8NGG5 319 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 CDHR1Q96JP9 859 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 DNAJC7Q99615 494 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 SIK3Q9Y2K2 1263 aa22.05■■□□□ 1.12
RTN1-202ENST00000342503 ZMYM2Q9UBW7 1377 aa22.04■■□□□ 1.12
RTN1-202ENST00000342503 UQCRHLA0A096LP55 91 aa22.04■■□□□ 1.12
RTN1-202ENST00000342503 TMEM150BA6NC51 233 aa22.04■■□□□ 1.12
RTN1-202ENST00000342503 UQCRHP07919 91 aa22.04■■□□□ 1.12
RTN1-202ENST00000342503 GNPTABQ3T906 1256 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms