RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 SLC30A9Q6PML9 568 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 SUPT20HQ8NEM7 779 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 LRRC37BQ96QE4 947 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 TYW1Q9NV66 732 aaKnown RBP13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 ARHGAP20Q9P2F6 1191 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 HEG1Q9ULI3 1381 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 MAPK13O15264 365 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 SLC18A3Q16572 532 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 GLG1Q92896 1179 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 DDX20Q9UHI6 824 aaKnown RBP13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 ALKQ9UM73 1620 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 SARSP49591 514 aaKnown RBP13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 SEPT2Q15019 361 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 ALX1Q15699 326 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 ZYXQ15942 572 aaKnown RBP13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 USP38Q8NB14 1042 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 MTMR8Q96EF0 704 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 A0A087X0T9 212 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 SPAG7O75391 227 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 FAM228BP0C875 321 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 TCP10Q12799 353 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 LONRF1Q17RB8 773 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
SSX2IP-201ENST00000342203 RHOBTB3O94955 611 aa13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 WDR44Q5JSH3 913 aa13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 LIN9Q5TKA1 542 aa13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 GUF1Q8N442 669 aaKnown RBP13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 ESRRAP11474 423 aaPredicted RBP13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 CCDC89Q8N998 374 aa13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.24
SSX2IP-201ENST00000342203 MYL7Q01449 175 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 BATF3Q9NR55 127 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 RPS6KA5O75582 802 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 COASYQ13057 564 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 SLC29A2Q14542 456 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 DPP8Q6V1X1 898 aaPredicted RBP13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 AENQ8WTP8 325 aaKnown RBP13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 KAT2BQ92831 832 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 DNAJC12Q9UKB3 198 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 PCDHA1Q9Y5I3 950 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 ADGRB1O14514 1584 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 RCCD1A6NED2 376 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 RASSF10A6NK89 507 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 TDP2O95551 362 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 PSMD2Q13200 908 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 SPATA21Q7Z572 469 aa13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 NAP1L4Q99733 375 aaKnown RBP13.52□□□□□ -0.25
SSX2IP-201ENST00000342203 MAP3K7O43318 606 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 UFL1O94874 794 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 PRDX5P30044 214 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 FUKQ8N0W3 1084 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 USP15Q9Y4E8 981 aaPredicted RBP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 GYG2O15488 501 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 BRD2P25440 801 aaKnown RBP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 CREG2Q8IUH2 290 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 PAF1Q8N7H5 531 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 OPLAHO14841 1288 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 RFC4P35249 363 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 KCNJ1P48048 391 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 TTC1Q99614 292 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 ISCUQ9H1K1 167 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 SLITRK6Q9H5Y7 841 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 CHORDC1Q9UHD1 332 aaPredicted RBP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 UBXN2AP68543 259 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 GRK7Q8WTQ7 553 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 STOML1Q9UBI4 398 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 PXDNLA1KZ92 1463 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 COL15A1P39059 1388 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 PCP11498 1178 aaKnown RBP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 MAPK4P31152 587 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 TMCO4Q5TGY1 634 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 BSPRYQ5W0U4 402 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 CCDC137Q6PK04 289 aaKnown RBP13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 MAIP1Q8WWC4 291 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
SSX2IP-201ENST00000342203 SSU72P8A0A1W2PR75 194 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 POTECB2RU33 542 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 CAND2O75155 1236 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 SLC9A1P19634 815 aa13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 PSMC2P35998 433 aaKnown RBP13.5□□□□□ -0.25
SSX2IP-201ENST00000342203 MECOMQ03112 1051 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms