RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 RINT1Q6NUQ1 792 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 LDHDQ86WU2 507 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 MS4A14Q96JA4 679 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 CEP63Q96MT8 703 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 ZNF577Q9BSK1 485 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 CEP72Q9P209 647 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 A0A087X0T9 212 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 SLITRK3O94933 977 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 FAM228BP0C875 321 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 FAM193AP78312 1265 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 MOXD1Q6UVY6 613 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 BTNL9Q6UXG8 535 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 NR3C1P04150 777 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 HNRNPH3P31942 346 aaKnown RBP11.37□□□□□ -0.59
LIMA1-201ENST00000341247 INPP5BP32019 993 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 CYP2J2P51589 502 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 CDK17Q00537 523 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 TRIM58Q8NG06 486 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 HDAC7Q8WUI4 952 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 TSGA10Q9BZW7 698 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 SAMM50Q9Y512 469 aa11.37□□□□□ -0.59
LIMA1-201ENST00000341247 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 TBX3O15119 743 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 XRCC5P13010 732 aaKnown RBP11.36□□□□□ -0.59
LIMA1-201ENST00000341247 CCDC181Q5TID7 509 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 ALS2CR12Q96Q35 445 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 RAB21Q9UL25 225 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 CCPG1Q9ULG6 757 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 FER1L6Q2WGJ9 1857 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 C10orf71Q711Q0 1435 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 NFIBO00712 420 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
LIMA1-201ENST00000341247 ALAS1P13196 640 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 CIITAP33076 1130 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 USP14P54578 494 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 CASP8Q14790 479 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 ASIC2Q16515 512 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 HDXQ7Z353 690 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 CHURC1Q8WUH1 139 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 UNC45AQ9H3U1 944 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 VPS18Q9P253 973 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
LIMA1-201ENST00000341247 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 FRMD3A2A2Y4 597 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 TMEM150BA6NC51 233 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 LRRIQ3A6PVS8 624 aaPredicted RBP11.36□□□□□ -0.59
LIMA1-201ENST00000341247 EYA4O95677 639 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 GNA14O95837 355 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 MYBL2P10244 700 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 KLRC1P26715 233 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 PRELPP51888 382 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 EXOC3L4Q17RC7 722 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 KIAA0753Q2KHM9 967 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 CEP55Q53EZ4 464 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 UTP14CQ5TAP6 766 aaKnown RBP11.36□□□□□ -0.59
LIMA1-201ENST00000341247 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 IL31RAQ8NI17 732 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
LIMA1-201ENST00000341247 AJAP1Q9UKB5 411 aaPredicted RBP11.36□□□□□ -0.59
LIMA1-201ENST00000341247 SNX12Q9UMY4 172 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 L1RE1Q9UN81 338 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 JRKLQ9Y4A0 524 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 ASTN1O14525 1302 aa11.36□□□□□ -0.59
LIMA1-201ENST00000341247 SERPING1P05155 500 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 VIL1P09327 827 aaKnown RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 CXCL9Q07325 125 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 OSBPL9Q96SU4 736 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 PGAP2Q9UHJ9 254 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 WNT10BO00744 389 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 CALUO43852 315 aaPredicted RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 PALMO75781 387 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 AFPP02771 609 aaKnown RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 CAP2P40123 477 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 MMP14P50281 582 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 CKAP4Q07065 602 aaKnown RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 ASTE1Q2TB18 679 aaPredicted RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 HOOK2Q96ED9 719 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 HSD17B14Q9BPX1 270 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 MRPL11Q9Y3B7 192 aaKnown RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 PSMD10O75832 226 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 TRIM49P0CI25 452 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 TRIM49CP0CI26 452 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 EPB41P11171 864 aaKnown RBP11.35□□□□□ -0.59
LIMA1-201ENST00000341247 PTK2Q05397 1052 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 ODR4Q5SWX8 454 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 CREG2Q8IUH2 290 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 NOX5Q96PH1 765 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 LXNQ9BS40 222 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 WDR11Q9BZH6 1224 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 GCNT4Q9P109 453 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
LIMA1-201ENST00000341247 TMCO5BA8MYB1 307 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms