RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KCNJ6P48051 423 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 STAT5BP51692 787 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 FOSBP53539 338 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 ZNF746Q6NUN9 644 aaPredicted RBP17.43■□□□□ 0.38
VAPA-201ENST00000340541 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 LRRC8DQ7L1W4 858 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 CCDC60Q8IWA6 550 aaPredicted RBP17.43■□□□□ 0.38
VAPA-201ENST00000340541 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 GJA10Q969M2 543 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 RIT2Q99578 217 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
VAPA-201ENST00000340541 ABHD14A-ACY1A0A1B0GW23 586 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 BTBD18B2RXH4 712 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 SLC37A4O43826 429 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 KRT76Q01546 638 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 PPFIA1Q13136 1202 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 MARCH8Q5T0T0 291 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 CNKSR3Q6P9H4 555 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 B3GNT9Q6UX72 402 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 NEK8Q86SG6 692 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
VAPA-201ENST00000340541 ETNPPLQ8TBG4 499 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 AZI2Q9H6S1 392 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 MTCH2Q9Y6C9 303 aa17.42■□□□□ 0.38
VAPA-201ENST00000340541 MBLAC1A4D2B0 266 aaPredicted RBP17.41■□□□□ 0.38
VAPA-201ENST00000340541 PSMD10O75832 226 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 GNAT1P11488 350 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 ATP4AP20648 1035 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 TAP1Q03518 808 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 MBTPS1Q14703 1052 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 GRIK4Q16099 956 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 LETM2Q2VYF4 491 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 ZNF618Q5T7W0 954 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 PPP4R3AQ6IN85 833 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 MIS18BP1Q6P0N0 1132 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
VAPA-201ENST00000340541 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
VAPA-201ENST00000340541 DDX25Q9UHL0 483 aaKnown RBP17.41■□□□□ 0.38
VAPA-201ENST00000340541 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
VAPA-201ENST00000340541 TLL1O43897 1013 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 NBNO60934 754 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 INSRRP14616 1297 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 SLC26A2P50443 739 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 WDR5P61964 334 aaKnown RBP17.4■□□□□ 0.38
VAPA-201ENST00000340541 HMGN5P82970 282 aaKnown RBP17.4■□□□□ 0.38
VAPA-201ENST00000340541 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 LRCH2Q5VUJ6 765 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 SWSAP1Q6NVH7 229 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 RUFY4Q6ZNE9 571 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 ADAMTS19Q8TE59 1207 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 BRMS1Q9HCU9 246 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 KCNMB3Q9NPA1 279 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 ZNF302Q9NR11 478 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 LMCD1Q9NZU5 365 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 COG5Q9UP83 839 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 PCDHA10Q9Y5I2 948 aa17.4■□□□□ 0.38
VAPA-201ENST00000340541 MAFBQ9Y5Q3 323 aaPredicted RBP17.4■□□□□ 0.38
VAPA-201ENST00000340541 WNT7AO00755 349 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 BACH1O14867 736 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 GAS7O60861 476 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 GCFC2P16383 781 aaKnown RBP17.39■□□□□ 0.37
VAPA-201ENST00000340541 THPOP40225 353 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 TRIM29Q14134 588 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 IKBKEQ14164 716 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 FAM160B1Q5W0V3 765 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 FBXO18Q8NFZ0 1043 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 ATP8B4Q8TF62 1192 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 ZBTB10Q96DT7 871 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 C8orf76Q96K31 380 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 TEKT3Q9BXF9 490 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 UNC45AQ9H3U1 944 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 TUBE1Q9UJT0 475 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 SIP14410 1827 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 IGSF9BQ9UPX0 1349 aa17.39■□□□□ 0.37
VAPA-201ENST00000340541 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 RRN3P2A6NIE6 340 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 WDR64B1ANS9 1081 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
VAPA-201ENST00000340541 CAND2O75155 1236 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 PSAPP07602 524 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 BMP1P13497 986 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 TCTN1Q2MV58 587 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 PDXDC2PQ6P474 469 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 RPAINQ86UA6 219 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 TRAPPC12Q8WVT3 735 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 HAS1Q92839 578 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 UHRF1Q96T88 793 aaPredicted RBP17.38■□□□□ 0.37
VAPA-201ENST00000340541 RAD9AQ99638 391 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 ZBED2Q9BTP6 218 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 OSBPL7Q9BZF2 842 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 DISC1Q9NRI5 854 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 MUC3AQ02505 3323 aa17.38■□□□□ 0.37
VAPA-201ENST00000340541 ZBTB42B2RXF5 422 aa17.37■□□□□ 0.37
VAPA-201ENST00000340541 MCM2P49736 904 aa17.37■□□□□ 0.37
VAPA-201ENST00000340541 IGBP1P78318 339 aa17.37■□□□□ 0.37
VAPA-201ENST00000340541 TAF2Q6P1X5 1199 aa17.37■□□□□ 0.37
VAPA-201ENST00000340541 ARNTL2Q8WYA1 636 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms