RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 YBX2Q9Y2T7 364 aaKnown RBP15.1■□□□□ 0.01
SIRPB3P-201ENST00000340424 PCDHA2Q9Y5H9 948 aa15.1■□□□□ 0.01
SIRPB3P-201ENST00000340424 WDR64B1ANS9 1081 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 PSAPP07602 524 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 CTSHP09668 335 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 SFNP31947 248 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 GRIN2CQ14957 1233 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 NPY5RQ15761 445 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 ME3Q16798 604 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 IER5Q5VY09 327 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 PDXDC2PQ6P474 469 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 RDM1Q8NG50 284 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 MYLIPQ8WY64 445 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 SLC5A5Q92911 643 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 FAM167AQ96KS9 214 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 GAS2L1Q99501 681 aaPredicted RBP15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 NAP1L4Q99733 375 aaKnown RBP15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 BRMS1Q9HCU9 246 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 ORC3Q9UBD5 711 aaPredicted RBP15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 SQORQ9Y6N5 450 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 CHD7Q9P2D1 2997 aa15.09■□□□□ 0.01
SIRPB3P-201ENST00000340424 CCDC194A0A1B0GVG4 234 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 M0QZ92 97 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 HAX1O00165 279 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 MSH4O15457 936 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 TLL1O43897 1013 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 GAS7O60861 476 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 CTDNEP1O95476 244 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 SEC24BO95487 1268 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 AMHP03971 560 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 GCFC2P16383 781 aaKnown RBP15.08■□□□□ 0
SIRPB3P-201ENST00000340424 JAK3P52333 1124 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 RABGGTBP53611 331 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 IGBP1P78318 339 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 C8orf34Q49A92 452 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 ZNF484Q5JVG2 852 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 RUFY4Q6ZNE9 571 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 CCDC60Q8IWA6 550 aaPredicted RBP15.08■□□□□ 0
SIRPB3P-201ENST00000340424 NME8Q8N427 588 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 USP38Q8NB14 1042 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 DBF4BQ8NFT6 615 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 BBXQ8WY36 941 aaPredicted RBP15.08■□□□□ 0
SIRPB3P-201ENST00000340424 MBOAT7Q96N66 472 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 AIFM3Q96NN9 605 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 CEP131Q9UPN4 1083 aa15.08■□□□□ 0
SIRPB3P-201ENST00000340424 MAFBQ9Y5Q3 323 aaPredicted RBP15.08■□□□□ 0
SIRPB3P-201ENST00000340424 UNC80Q8N2C7 3258 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 SMIM35A0A1B0GVV1 85 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 GJB5O95377 273 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 CA3P07451 260 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 MRPS6P82932 125 aaKnown RBP15.07■□□□□ 0
SIRPB3P-201ENST00000340424 MGAT3Q09327 533 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 LRCH2Q5VUJ6 765 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 PPP4R3AQ6IN85 833 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 SWSAP1Q6NVH7 229 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 ZNF579Q8NAF0 562 aaKnown RBP15.07■□□□□ 0
SIRPB3P-201ENST00000340424 MAFAQ8NHW3 353 aaPredicted RBP15.07■□□□□ 0
SIRPB3P-201ENST00000340424 KIF12Q96FN5 646 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 ZBED2Q9BTP6 218 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 TEKT3Q9BXF9 490 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 IFIH1Q9BYX4 1025 aaKnown RBP15.07■□□□□ 0
SIRPB3P-201ENST00000340424 KCNJ14Q9UNX9 436 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 LIMCH1Q9UPQ0 1083 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 SAMM50Q9Y512 469 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 IGSF9BQ9UPX0 1349 aa15.07■□□□□ 0
SIRPB3P-201ENST00000340424 MICAL3Q7RTP6 2002 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 EDIL3O43854 480 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 CHRNA1P02708 482 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 DEFB103AP81534 67 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 MTHFD1LQ6UB35 978 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 NEK8Q86SG6 692 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 CKAP2LQ8IYA6 745 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 SLC17A8Q8NDX2 589 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 NSUN7Q8NE18 718 aaKnown RBP15.06■□□□□ 0
SIRPB3P-201ENST00000340424 DNAJB3Q8WWF6 145 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 RAD9AQ99638 391 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 DISC1Q9NRI5 854 aa15.06■□□□□ 0
SIRPB3P-201ENST00000340424 DDX25Q9UHL0 483 aaKnown RBP15.06■□□□□ 0
SIRPB3P-201ENST00000340424 PSMD10O75832 226 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 MYOGP15173 224 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 KRT2P35908 639 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 TRIM29Q14134 588 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 INF2Q27J81 1249 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 TCTN1Q2MV58 587 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 FBXO47Q5MNV8 452 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 TSHZ1Q6ZSZ6 1077 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 NECAB1Q8N987 351 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 ETNPPLQ8TBG4 499 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 ZSCAN31Q96LW9 406 aaPredicted RBP15.05■□□□□ -0
SIRPB3P-201ENST00000340424 FAM20AQ96MK3 541 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 LLPHQ9BRT6 129 aaKnown RBP15.05■□□□□ -0
SIRPB3P-201ENST00000340424 PRDM12Q9H4Q4 367 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 GABBR1Q9UBS5 961 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 INSL6Q9Y581 213 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 TRPV2Q9Y5S1 764 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 CDY2AQ9Y6F7 541 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 KDM3AQ9Y4C1 1321 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 PTPRSQ13332 1948 aa15.05■□□□□ -0
SIRPB3P-201ENST00000340424 MYH9P35579 1960 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms