RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CEP55Q53EZ4 464 aa15.98■□□□□ 0.15
RET-201ENST00000340058 ZC2HC1CQ53FD0 456 aaPredicted RBP15.98■□□□□ 0.15
RET-201ENST00000340058 CCDC121Q6ZUS5 278 aa15.98■□□□□ 0.15
RET-201ENST00000340058 PASD1Q8IV76 773 aa15.98■□□□□ 0.15
RET-201ENST00000340058 SMAP1Q8IYB5 467 aaPredicted RBP15.98■□□□□ 0.15
RET-201ENST00000340058 GUF1Q8N442 669 aaKnown RBP15.98■□□□□ 0.15
RET-201ENST00000340058 RTFDC1Q9BY42 306 aaPredicted RBP15.98■□□□□ 0.15
RET-201ENST00000340058 E7EVH7 732 aa15.97■□□□□ 0.15
RET-201ENST00000340058 PALMO75781 387 aa15.97■□□□□ 0.15
RET-201ENST00000340058 MAP3K9P80192 1104 aa15.97■□□□□ 0.15
RET-201ENST00000340058 KNOP1Q1ED39 458 aaKnown RBP15.97■□□□□ 0.15
RET-201ENST00000340058 BRDTQ58F21 947 aaPredicted RBP15.97■□□□□ 0.15
RET-201ENST00000340058 TC2NQ8N9U0 490 aa15.97■□□□□ 0.15
RET-201ENST00000340058 SHPRHQ149N8 1683 aa15.97■□□□□ 0.15
RET-201ENST00000340058 ANKRD65E5RJM6 399 aa15.97■□□□□ 0.15
RET-201ENST00000340058 LRP10Q7Z4F1 713 aa15.97■□□□□ 0.15
RET-201ENST00000340058 FAM20AQ96MK3 541 aa15.97■□□□□ 0.15
RET-201ENST00000340058 ZNF70Q9UC06 446 aaPredicted RBP15.97■□□□□ 0.15
RET-201ENST00000340058 CNOT7Q9UIV1 285 aaKnown RBP15.97■□□□□ 0.15
RET-201ENST00000340058 DAPK3O43293 454 aa15.97■□□□□ 0.15
RET-201ENST00000340058 THAP12O43422 761 aa15.97■□□□□ 0.15
RET-201ENST00000340058 SERPING1P05155 500 aa15.97■□□□□ 0.15
RET-201ENST00000340058 PPP4CP60510 307 aa15.97■□□□□ 0.15
RET-201ENST00000340058 CCDC170Q8IYT3 715 aa15.97■□□□□ 0.15
RET-201ENST00000340058 C7orf31Q8N865 590 aa15.97■□□□□ 0.15
RET-201ENST00000340058 RPGRIP1Q96KN7 1286 aa15.97■□□□□ 0.15
RET-201ENST00000340058 ZMYND12Q9H0C1 365 aa15.97■□□□□ 0.15
RET-201ENST00000340058 RPAP3Q9H6T3 665 aaPredicted RBP15.97■□□□□ 0.15
RET-201ENST00000340058 VPS37BQ9H9H4 285 aa15.97■□□□□ 0.15
RET-201ENST00000340058 SMARCAL1Q9NZC9 954 aa15.97■□□□□ 0.15
RET-201ENST00000340058 JRKLQ9Y4A0 524 aa15.97■□□□□ 0.15
RET-201ENST00000340058 KRT15P19012 456 aa15.96■□□□□ 0.15
RET-201ENST00000340058 ARL1P40616 181 aaPredicted RBP15.96■□□□□ 0.15
RET-201ENST00000340058 GNGT1P63211 74 aa15.96■□□□□ 0.15
RET-201ENST00000340058 ZNF211Q13398 564 aaPredicted RBP15.96■□□□□ 0.15
RET-201ENST00000340058 ZFPM1Q8IX07 1006 aa15.96■□□□□ 0.15
RET-201ENST00000340058 ZNRF3Q9ULT6 936 aa15.96■□□□□ 0.15
RET-201ENST00000340058 ZNF148Q9UQR1 794 aa15.96■□□□□ 0.15
RET-201ENST00000340058 PCDHAC2Q9Y5I4 1007 aa15.96■□□□□ 0.15
RET-201ENST00000340058 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
RET-201ENST00000340058 SLCO1A2P46721 670 aa15.96■□□□□ 0.15
RET-201ENST00000340058 DYNLT1P63172 113 aa15.96■□□□□ 0.15
RET-201ENST00000340058 DDR1Q08345 913 aa15.96■□□□□ 0.15
RET-201ENST00000340058 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
RET-201ENST00000340058 BAATQ14032 418 aaPredicted RBP15.96■□□□□ 0.15
RET-201ENST00000340058 CASC4Q6P4E1 433 aa15.96■□□□□ 0.15
RET-201ENST00000340058 CEP57Q86XR8 500 aa15.96■□□□□ 0.15
RET-201ENST00000340058 FAM213AQ9BRX8 229 aa15.96■□□□□ 0.15
RET-201ENST00000340058 FAM204AQ9H8W3 233 aa15.96■□□□□ 0.15
RET-201ENST00000340058 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
RET-201ENST00000340058 DENND3A2RUS2 1198 aa15.96■□□□□ 0.15
RET-201ENST00000340058 GAS8O95995 478 aa15.96■□□□□ 0.15
RET-201ENST00000340058 PNMA6AP0CW24 399 aaPredicted RBP15.96■□□□□ 0.15
RET-201ENST00000340058 CCND2P30279 289 aa15.96■□□□□ 0.15
RET-201ENST00000340058 IFNAR2P48551 515 aa15.96■□□□□ 0.15
RET-201ENST00000340058 NKIRAS1Q9NYS0 192 aa15.96■□□□□ 0.15
RET-201ENST00000340058 ATP8A1Q9Y2Q0 1164 aa15.96■□□□□ 0.15
RET-201ENST00000340058 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.96■□□□□ 0.15
RET-201ENST00000340058 ZNF185O15231 689 aa15.96■□□□□ 0.14
RET-201ENST00000340058 MFAP3P55082 362 aa15.96■□□□□ 0.14
RET-201ENST00000340058 ZSCAN26Q16670 478 aa15.96■□□□□ 0.14
RET-201ENST00000340058 GOLPH3Q9H4A6 298 aa15.96■□□□□ 0.14
RET-201ENST00000340058 TXNDC16Q9P2K2 825 aa15.96■□□□□ 0.14
RET-201ENST00000340058 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.96■□□□□ 0.14
RET-201ENST00000340058 A0A1B0GTH6 734 aa15.95■□□□□ 0.14
RET-201ENST00000340058 N4BP1O75113 896 aaKnown RBP15.95■□□□□ 0.14
RET-201ENST00000340058 TNNC2P02585 160 aa15.95■□□□□ 0.14
RET-201ENST00000340058 SRGNP10124 158 aa15.95■□□□□ 0.14
RET-201ENST00000340058 PPFIA1Q13136 1202 aa15.95■□□□□ 0.14
RET-201ENST00000340058 GLYCTKQ8IVS8 523 aa15.95■□□□□ 0.14
RET-201ENST00000340058 CTAGE3PQ8IX95 158 aa15.95■□□□□ 0.14
RET-201ENST00000340058 DDX4Q9NQI0 724 aaKnown RBP15.95■□□□□ 0.14
RET-201ENST00000340058 CAMTA1Q9Y6Y1 1673 aa15.95■□□□□ 0.14
RET-201ENST00000340058 PALM3A6NDB9 673 aaPredicted RBP15.95■□□□□ 0.14
RET-201ENST00000340058 LMNB1P20700 586 aa15.95■□□□□ 0.14
RET-201ENST00000340058 GABPB1Q06547 395 aaPredicted RBP15.95■□□□□ 0.14
RET-201ENST00000340058 DENND2CQ68D51 928 aa15.95■□□□□ 0.14
RET-201ENST00000340058 REEP2Q9BRK0 252 aa15.95■□□□□ 0.14
RET-201ENST00000340058 LRRC4BQ9NT99 713 aa15.95■□□□□ 0.14
RET-201ENST00000340058 RNF181Q9P0P0 153 aa15.95■□□□□ 0.14
RET-201ENST00000340058 ATP1A1P05023 1023 aaKnown RBP15.95■□□□□ 0.14
RET-201ENST00000340058 HHIPL2Q6UWX4 724 aa15.95■□□□□ 0.14
RET-201ENST00000340058 SLC51AQ86UW1 340 aa15.95■□□□□ 0.14
RET-201ENST00000340058 NFU1Q9UMS0 254 aa15.95■□□□□ 0.14
RET-201ENST00000340058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.94■□□□□ 0.14
RET-201ENST00000340058 PPP1R3GB7ZBB8 358 aa15.94■□□□□ 0.14
RET-201ENST00000340058 GYPCP04921 128 aa15.94■□□□□ 0.14
RET-201ENST00000340058 MAPK4P31152 587 aa15.94■□□□□ 0.14
RET-201ENST00000340058 QARSP47897 775 aaKnown RBP15.94■□□□□ 0.14
RET-201ENST00000340058 NPEPPSP55786 919 aa15.94■□□□□ 0.14
RET-201ENST00000340058 FBF1Q8TES7 1133 aa15.94■□□□□ 0.14
RET-201ENST00000340058 ADPGKQ9BRR6 497 aa15.94■□□□□ 0.14
RET-201ENST00000340058 CHORDC1Q9UHD1 332 aaPredicted RBP15.94■□□□□ 0.14
RET-201ENST00000340058 HERC5Q9UII4 1024 aaKnown RBP15.94■□□□□ 0.14
RET-201ENST00000340058 MYBP10242 640 aa15.94■□□□□ 0.14
RET-201ENST00000340058 MXRA7P84157 204 aa15.94■□□□□ 0.14
RET-201ENST00000340058 NR1I3Q14994 352 aa15.94■□□□□ 0.14
RET-201ENST00000340058 MIS18BP1Q6P0N0 1132 aa15.94■□□□□ 0.14
RET-201ENST00000340058 SLC8A3P57103 927 aa15.94■□□□□ 0.14
RET-201ENST00000340058 PLA2G4FQ68DD2 849 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms