RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 MAFBQ9Y5Q3 323 aaPredicted RBP16.49■□□□□ 0.23
CSRP1-201ENST00000340006 IGKV6D-21A0A0A0MT36 114 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 ZEB2O60315 1214 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 MARK3P27448 753 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 MTFR1Q15390 333 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 CAMK4Q16566 473 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 OTUD6AQ7L8S5 288 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 C4orf19Q8IY42 314 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 CCDC43Q96MW1 224 aaKnown RBP16.48■□□□□ 0.23
CSRP1-201ENST00000340006 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.48■□□□□ 0.23
CSRP1-201ENST00000340006 NRBP2Q9NSY0 501 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 WRAP73Q9P2S5 460 aaPredicted RBP16.48■□□□□ 0.23
CSRP1-201ENST00000340006 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 SYNRGQ9UMZ2 1314 aa16.48■□□□□ 0.23
CSRP1-201ENST00000340006 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 CCL5P13501 91 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 YWHABP31946 246 aaKnown RBP16.47■□□□□ 0.23
CSRP1-201ENST00000340006 AFMP43652 599 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 CCDC183Q5T5S1 534 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 SV2BQ7L1I2 683 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 PLPPR4Q7Z2D5 763 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 TRIM50Q86XT4 487 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 STAMQ92783 540 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 PCYT2Q99447 389 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 ERAP1Q9NZ08 941 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 H3BRB1 525 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 LGALS2P05162 132 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 ZNF286BP0CG31 522 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 MCM6Q14566 821 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 TMEM119Q4V9L6 283 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 KRBA2Q6ZNG9 492 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 KCNK18Q7Z418 384 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 RNF180Q86T96 592 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 KCTD17Q8N5Z5 321 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 LARP4BQ92615 738 aaKnown RBP16.47■□□□□ 0.23
CSRP1-201ENST00000340006 RAD54LQ92698 747 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 TUT1Q9H6E5 874 aaKnown RBP16.47■□□□□ 0.23
CSRP1-201ENST00000340006 STK17AQ9UEE5 414 aa16.47■□□□□ 0.23
CSRP1-201ENST00000340006 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
CSRP1-201ENST00000340006 ZNF215Q9UL58 517 aaPredicted RBP16.47■□□□□ 0.23
CSRP1-201ENST00000340006 ZNF862O60290 1169 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 LGR5O75473 907 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 XRCC6P12956 609 aaKnown RBP eCLIP16.46■□□□□ 0.23
CSRP1-201ENST00000340006 PRKCEQ02156 737 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 E2F4Q16254 413 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 AFAP1L1Q8TED9 768 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 TIGD1Q96MW7 591 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 CUEDC2Q9H467 287 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 SEPT9Q9UHD8 586 aaPredicted RBP16.46■□□□□ 0.23
CSRP1-201ENST00000340006 KAT6AQ92794 2004 aa16.46■□□□□ 0.23
CSRP1-201ENST00000340006 MYADML2A6NDP7 307 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 KPNA6O60684 536 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 EYA4O95677 639 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 PLA2G4BP0C869 781 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 SLC26A2P50443 739 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 AMPD3Q01432 767 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 KCNA10Q16322 511 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 NAALADL2Q58DX5 795 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 XKR9Q5GH70 373 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 XKR3Q5GH77 459 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 LHX8Q68G74 356 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 VTI1AQ96AJ9 217 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 DEFB118Q96PH6 123 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 SH2D3AQ9BRG2 576 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 BLOC1S4Q9NUP1 217 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 TRPC6Q9Y210 931 aa16.46■□□□□ 0.22
CSRP1-201ENST00000340006 BRCA2P51587 3418 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 EMSYQ7Z589 1322 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 ARHGEF35A5YM69 484 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 TMEM150BA6NC51 233 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
CSRP1-201ENST00000340006 LYPLA2O95372 231 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 ATP4AP20648 1035 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 GSE1Q14687 1217 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 ANO5Q75V66 913 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 PCSK9Q8NBP7 692 aaKnown RBP16.45■□□□□ 0.22
CSRP1-201ENST00000340006 ARRDC4Q8NCT1 418 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 PAGE5Q96GU1 130 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 CEP170P1Q96L14 293 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 C16orf70Q9BSU1 422 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 UPF3AQ9H1J1 476 aaKnown RBP16.45■□□□□ 0.22
CSRP1-201ENST00000340006 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 RNPEPQ9H4A4 650 aa16.45■□□□□ 0.22
CSRP1-201ENST00000340006 IGSF9BQ9UPX0 1349 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 SYCE3A1L190 88 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 OATP04181 439 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 BBXQ8WY36 941 aaPredicted RBP16.44■□□□□ 0.22
CSRP1-201ENST00000340006 FAM167AQ96KS9 214 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 LRRC27Q9C0I9 530 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 TNMDQ9H2S6 317 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
CSRP1-201ENST00000340006 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
CSRP1-201ENST00000340006 CTAGE5O15320 804 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms