RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CYP3A7-CYP3A51PA0A087WV96 503 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 NOL4O94818 638 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 PTPRAP18433 802 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 CYP3A7P24462 503 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 CXCR5P32302 372 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 POLR2FP61218 127 aaKnown RBP17.96■□□□□ 0.47
LITAF-201ENST00000339430 FAM193AP78312 1265 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 ENOX2Q16206 610 aaKnown RBP17.96■□□□□ 0.47
LITAF-201ENST00000339430 PNMA8AQ86V59 439 aaPredicted RBP17.96■□□□□ 0.47
LITAF-201ENST00000339430 FBXO11Q86XK2 927 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 GSPT2Q8IYD1 628 aaKnown RBP17.96■□□□□ 0.47
LITAF-201ENST00000339430 SLFN12Q8IYM2 578 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 ETNPPLQ8TBG4 499 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 GDAP1L1Q96MZ0 367 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 KCTD10Q9H3F6 313 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 VPS18Q9P253 973 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.47
LITAF-201ENST00000339430 SPDYE3A6NKU9 549 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 FAM86B1E9PN63 330 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 BUB1O43683 1085 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 LCA5LO95447 670 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 FAM86B2P0C5J1 330 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 CYP4A11Q02928 519 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 ARID5AQ03989 594 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 SPIRE1Q08AE8 756 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 GPS2Q13227 327 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 DGKZQ13574 1117 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 SYDE2Q5VT97 1194 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 HGSNATQ68CP4 663 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 COG1Q8WTW3 980 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 SNX12Q9UMY4 172 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 JRKLQ9Y4A0 524 aa17.96■□□□□ 0.47
LITAF-201ENST00000339430 NCK2O43639 380 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 EIF3JO75822 258 aaKnown RBP17.95■□□□□ 0.46
LITAF-201ENST00000339430 TNNT3P45378 269 aaPredicted RBP17.95■□□□□ 0.46
LITAF-201ENST00000339430 STAT2P52630 851 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 SPP2Q13103 211 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 AP3B2Q13367 1082 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 ADAM9Q13443 819 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 NFRKBQ6P4R8 1299 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.95■□□□□ 0.46
LITAF-201ENST00000339430 CYP2W1Q8TAV3 490 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 CCDC102AQ96A19 550 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 CDCA5Q96FF9 252 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 MBOAT7Q96N66 472 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 SMARCAL1Q9NZC9 954 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 CLEC11AQ9Y240 323 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 TLR2O60603 784 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 MTMR2Q13614 643 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 HAUS3Q68CZ6 603 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 BTNL9Q6UXG8 535 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 SLC30A10Q6XR72 485 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 TRIM59Q8IWR1 403 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 CRYGNQ8WXF5 182 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 CEP63Q96MT8 703 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 EHD2Q9NZN4 543 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 CEP72Q9P209 647 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 ADAM21Q9UKJ8 722 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
LITAF-201ENST00000339430 PPP1R12BO60237 982 aaPredicted RBP17.94■□□□□ 0.46
LITAF-201ENST00000339430 PHACTR2O75167 634 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 TUBBP07437 444 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 NAP1L1P55209 391 aaKnown RBP17.94■□□□□ 0.46
LITAF-201ENST00000339430 MRPS25P82663 173 aaKnown RBP17.94■□□□□ 0.46
LITAF-201ENST00000339430 ASTE1Q2TB18 679 aaPredicted RBP17.94■□□□□ 0.46
LITAF-201ENST00000339430 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 CREG2Q8IUH2 290 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 LENG9Q96B70 501 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 RPGRIP1Q96KN7 1286 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 PRR12Q9ULL5 1215 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 SPATA31C1P0DKV0 1188 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 HOXA7P31268 230 aaPredicted RBP17.94■□□□□ 0.46
LITAF-201ENST00000339430 MATR3P43243 847 aaKnown RBP eCLIP17.94■□□□□ 0.46
LITAF-201ENST00000339430 FOXR2Q6PJQ5 311 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 SAMD1Q6SPF0 538 aaPredicted RBP17.94■□□□□ 0.46
LITAF-201ENST00000339430 REEP2Q9BRK0 252 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 BCAS3Q9H6U6 928 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 FAN1Q9Y2M0 1017 aa17.94■□□□□ 0.46
LITAF-201ENST00000339430 NR2F2P24468 414 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 RAPGEF1Q13905 1077 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 GIT2Q14161 759 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 SLC9C1Q4G0N8 1177 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.93■□□□□ 0.46
LITAF-201ENST00000339430 SFR1Q86XK3 245 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 ZNF280CQ8ND82 737 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 ALS2CR12Q96Q35 445 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 WDR18Q9BV38 432 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 DNM3Q9UQ16 869 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 RSPH10B2B2RC85 870 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 OPLAHO14841 1288 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 GNA14O95837 355 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 RSPH10BP0C881 870 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 MYBL2P10244 700 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 VGLL4Q14135 290 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 ERMNQ8TAM6 284 aa17.93■□□□□ 0.46
LITAF-201ENST00000339430 OSBPL9Q96SU4 736 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms