RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
CSMD2-202ENST00000338325 EXOC6Q8TAG9 804 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
CSMD2-202ENST00000338325 AZI2Q9H6S1 392 aa13.17□□□□□ -0.3
CSMD2-202ENST00000338325 JPH1Q9HDC5 661 aaPredicted RBP13.17□□□□□ -0.3
CSMD2-202ENST00000338325 TMEM221A6NGB7 291 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 LOC730098B7Z3J9 87 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 M0R296 226 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 SGSM2O43147 1006 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 TRIM67Q6ZTA4 783 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 CELF4Q9BZC1 486 aaKnown RBP13.16□□□□□ -0.3
CSMD2-202ENST00000338325 SLC9A2Q9UBY0 812 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 LRFN2Q9ULH4 789 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 PCDHA6Q9UN73 950 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 PCDHA8Q9Y5H6 950 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 PCDHA2Q9Y5H9 948 aa13.16□□□□□ -0.3
CSMD2-202ENST00000338325 KDM3AQ9Y4C1 1321 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 SMIM35A0A1B0GVV1 85 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 PRC1O43663 620 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 GLP2RO95838 553 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 GATMP50440 423 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 PLCB4Q15147 1175 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 PKN1Q16512 942 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 RBM23Q86U06 439 aaKnown RBP13.15□□□□□ -0.3
CSMD2-202ENST00000338325 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
CSMD2-202ENST00000338325 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 TRAPPC12Q8WVT3 735 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
CSMD2-202ENST00000338325 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
CSMD2-202ENST00000338325 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
CSMD2-202ENST00000338325 EVPLQ92817 2033 aa13.15□□□□□ -0.3
CSMD2-202ENST00000338325 NFASCO94856 1347 aa13.15□□□□□ -0.31
CSMD2-202ENST00000338325 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
CSMD2-202ENST00000338325 CALM1P0DP23 149 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 CALM2P0DP24 149 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 CALM3P0DP25 149 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 RXRAP19793 462 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 SARSP49591 514 aaKnown RBP13.14□□□□□ -0.31
CSMD2-202ENST00000338325 PTPN5P54829 565 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 ZXDAP98168 799 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 KRT76Q01546 638 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 UBE3AQ05086 875 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
CSMD2-202ENST00000338325 PLPPR4Q7Z2D5 763 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 TMTC2Q8N394 836 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 NME8Q8N427 588 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 PBXIP1Q96AQ6 731 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 TMEM87BQ96K49 555 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 PRRX2Q99811 253 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 MXRA8Q9BRK3 442 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 TMX1Q9H3N1 280 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 PCDHGC5Q9Y5F6 944 aa13.14□□□□□ -0.31
CSMD2-202ENST00000338325 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 IBSPP21815 317 aaPredicted RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 MCM5P33992 734 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 STAT5BP51692 787 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 ACTR2P61160 394 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 PHOX2BQ99453 314 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 PHF7Q9BWX1 381 aaPredicted RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 TLE6Q9H808 572 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 AAASQ9NRG9 546 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 PCDHB7Q9Y5E2 793 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 PCDHB12Q9Y5F1 795 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 MYH9P35579 1960 aaKnown RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 NFX1Q12986 1120 aaKnown RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
CSMD2-202ENST00000338325 IER5LQ5T953 404 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 MTHFD1LQ6UB35 978 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 TMTC3Q6ZXV5 915 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 MICAL1Q8TDZ2 1067 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 ERVK-5Q9HDB9 667 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 TLR9Q9NR96 1032 aa13.13□□□□□ -0.31
CSMD2-202ENST00000338325 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 MGEA5O60502 916 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
CSMD2-202ENST00000338325 LIFRP42702 1097 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 SLC26A2P50443 739 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 ODR4Q5SWX8 454 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 RAB11FIP4Q86YS3 637 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 ATP8B4Q8TF62 1192 aa13.12□□□□□ -0.31
CSMD2-202ENST00000338325 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms