RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NME8Q8N427 588 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 MRPL38Q96DV4 380 aaKnown RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 NECAB3Q96P71 396 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 OSBPL7Q9BZF2 842 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 SCG2P13521 617 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 GNA11P29992 359 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 CDC27P30260 824 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
CAPN3-202ENST00000337571 SREBF1P36956 1147 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 FUT2Q10981 343 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 PLCB4Q15147 1175 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 PFKFB3Q16875 520 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-202ENST00000337571 JAKMIP3Q5VZ66 844 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 NIPA1Q7RTP0 329 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 FTHL17Q9BXU8 183 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 RWDD3Q9Y3V2 267 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 PCDHA2Q9Y5H9 948 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 SQORQ9Y6N5 450 aa12.13□□□□□ -0.47
CAPN3-202ENST00000337571 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
CAPN3-202ENST00000337571 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
CAPN3-202ENST00000337571 REC8O95072 547 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 RB1P06400 928 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 C7P10643 843 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 PSMA5P28066 241 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 CLK2P49760 499 aaKnown RBP12.12□□□□□ -0.47
CAPN3-202ENST00000337571 MGAT3Q09327 533 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 TMEM62Q0P6H9 643 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-202ENST00000337571 TIGD5Q53EQ6 642 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 FBXO47Q5MNV8 452 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 EP400NLQ6ZTU2 488 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 PLA2G4DQ86XP0 818 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
CAPN3-202ENST00000337571 BANK1Q8NDB2 785 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 BICD2Q8TD16 824 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 BRF1Q92994 677 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 PCYT2Q99447 389 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 C1QTNF1Q9BXJ1 281 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 UBE2ZQ9H832 354 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-202ENST00000337571 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-202ENST00000337571 TBC1D22BQ9NU19 505 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 TRPV2Q9Y5S1 764 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 NLRC5Q86WI3 1866 aa12.12□□□□□ -0.47
CAPN3-202ENST00000337571 RALGAPA2Q2PPJ7 1873 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-202ENST00000337571 SMIM35A0A1B0GVV1 85 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
CAPN3-202ENST00000337571 PRPF3O43395 683 aaKnown RBP12.11□□□□□ -0.47
CAPN3-202ENST00000337571 HBP1O60381 514 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 ATG7O95352 703 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 CPA1P15085 419 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 COL9A1P20849 921 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 KCNA5P22460 613 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 KLRC1P26715 233 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 CD52P31358 61 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 HSPA4P34932 840 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 CTNNB1P35222 781 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 KRT76Q01546 638 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 PAK2Q13177 524 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 ITGB3BPQ13352 177 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-202ENST00000337571 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
CAPN3-202ENST00000337571 ODR4Q5SWX8 454 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 TRAPPC12Q8WVT3 735 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 ZBTB10Q96DT7 871 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 C11orf84Q9BUA3 381 aaPredicted RBP12.11□□□□□ -0.47
CAPN3-202ENST00000337571 CELF4Q9BZC1 486 aaKnown RBP12.11□□□□□ -0.47
CAPN3-202ENST00000337571 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 LRFN2Q9ULH4 789 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 SNX14Q9Y5W7 946 aa12.11□□□□□ -0.47
CAPN3-202ENST00000337571 ESYT2A0FGR8 921 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 NCK2O43639 380 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 CYP3A4P08684 503 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 BMPR1AP36894 532 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-202ENST00000337571 NFX1Q12986 1120 aaKnown RBP12.1□□□□□ -0.47
CAPN3-202ENST00000337571 LEXMQ3ZCV2 418 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 ZNF484Q5JVG2 852 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 ABHD15Q6UXT9 468 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 FAM43BQ6ZT52 329 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms