RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 AP1ARQ63HQ0 302 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZBTB10Q96DT7 871 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 TRIM31Q9BZY9 425 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 GCNT3O95395 438 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 SERPINB2P05120 415 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 XRCC5P13010 732 aaKnown RBP18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 CDC25CP30307 473 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 EXOC3L4Q17RC7 722 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZNF513Q8N8E2 541 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZC3H4Q9UPT8 1303 aaKnown RBP18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 ABCA3Q99758 1704 aa18.05■□□□□ 0.48
CDC42EP4-201ENST00000335793 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 TBC1D16Q8TBP0 767 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 SCFD1Q8WVM8 642 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 PPP1R11O60927 126 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 ATP2C2O75185 946 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 TBCAO75347 108 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 PTK2Q05397 1052 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 NAB2Q15742 525 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 PPP4R3AQ6IN85 833 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 EDEM3Q9BZQ6 932 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 SPDYE3A6NKU9 549 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 NOL4O94818 638 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 GUCY1A3Q02108 690 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 TMEM119Q4V9L6 283 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 ALKBH5Q6P6C2 394 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 TRMT1LQ7Z2T5 733 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 ADAT2Q7Z6V5 191 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 ERMNQ8TAM6 284 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 CEP63Q96MT8 703 aa18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 DDX4Q9NQI0 724 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 G3BP2Q9UN86 482 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-201ENST00000335793 PJA2O43164 708 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 CHMP2AO43633 222 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 GCFC2P16383 781 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 QRICH1Q2TAL8 776 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 GPATCH4Q5T3I0 446 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 PEX26Q7Z412 305 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 DDX42Q86XP3 938 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 UBLCP1Q8WVY7 318 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 EIF3HO15372 352 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 MED24O75448 989 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 CYP11B2P19099 503 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 COBLL1Q53SF7 1204 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 TTMPQ5BVD1 217 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 SFR1Q86XK3 245 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 PARD3BQ8TEW8 1205 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 U2AF1L4Q8WU68 220 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 ANO3Q9BYT9 981 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 PPANQ9NQ55 473 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 RNF14Q9UBS8 474 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 ABCB11O95342 1321 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 SNED1Q8TER0 1413 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 EIF4E1BA6NMX2 242 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 RAD51CO43502 376 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 PSMC6P62333 389 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 GLE1Q53GS7 698 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 FMNL3Q8IVF7 1028 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 TRIM59Q8IWR1 403 aa18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 QTRT2Q9H974 415 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP4-201ENST00000335793 LCA5LO95447 670 aa18.02■□□□□ 0.48
CDC42EP4-201ENST00000335793 ABCB4P21439 1286 aa18.02■□□□□ 0.48
CDC42EP4-201ENST00000335793 GBP2P32456 591 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP4-201ENST00000335793 SEPT2Q15019 361 aa18.02■□□□□ 0.48
CDC42EP4-201ENST00000335793 DDX47Q9H0S4 455 aaKnown RBP18.02■□□□□ 0.48
CDC42EP4-201ENST00000335793 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP4-201ENST00000335793 CASP5P51878 434 aa18.02■□□□□ 0.47
CDC42EP4-201ENST00000335793 ITIH3Q06033 890 aa18.02■□□□□ 0.47
CDC42EP4-201ENST00000335793 IFI16Q16666 785 aaKnown RBP18.02■□□□□ 0.47
CDC42EP4-201ENST00000335793 ASTE1Q2TB18 679 aaPredicted RBP18.02■□□□□ 0.47
CDC42EP4-201ENST00000335793 DAAM2Q86T65 1068 aa18.02■□□□□ 0.47
CDC42EP4-201ENST00000335793 CASKIN2Q8WXE0 1202 aa18.02■□□□□ 0.47
CDC42EP4-201ENST00000335793 BHMT2Q9H2M3 363 aa18.02■□□□□ 0.47
CDC42EP4-201ENST00000335793 KRIT1O00522 736 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 EDIL3O43854 480 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 AFPP02771 609 aaKnown RBP18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 MYBL1P10243 752 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 TAL1P17542 331 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 PLS1Q14651 629 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 SLFN13Q68D06 897 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 MCM8Q9UJA3 840 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 FLOT1O75955 427 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 HOXA13P31271 388 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 GJB7Q6PEY0 223 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 RDH13Q8NBN7 331 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 OR2W6PQ8NHA6 318 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 DHX36Q9H2U1 1008 aaKnown RBP18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 PLAAQ9Y263 795 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 GRID2IPA4D2P6 1211 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 EPB41P11171 864 aaKnown RBP18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 UCHL3P15374 230 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 CDC37Q16543 378 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 SLC30A10Q6XR72 485 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 BORCS6Q96GS4 357 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 DPH5Q9H2P9 285 aa18.01■□□□□ 0.47
CDC42EP4-201ENST00000335793 GOPCQ9HD26 462 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms